Lotus japonicus: 130746055
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Entry
130746055 CDS
T04348
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130746055
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130746055
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
Pre-60S particles
Helicases
130746055
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Utp25_C
Motif
Other DBs
NCBI-GeneID:
130746055
NCBI-ProteinID:
XP_057454547
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All DBs
Position
3:77096657..77105960
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AA seq
818 aa
AA seq
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MEEAVAAATPSSQRKAKRKSRTLASGDPELERLNSLSWNPTFPQQDDDNDPFSLFIGSNE
LEGGFLSLEEIDEADYGMDIHKPGGDDNKKQVVPKQGKKLKKQKHDGVDGARSSDDVPEV
ETDGEIVKDEEVKTEVKKKKKKKNKNKAAKENQKLEPQPDTGLDADVKGDVGEESIDETE
FYGWNELRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP
ILQRILEEREKAGKIEEEKGEKAEKYAPTGLLRSLIIAPTRELALQVTDHLKAVAKYINV
RVTPIVGGILAEKQERLLRSKPEIVVGTPGRLWELMSSGEKHLVELHSLSFFVLDEADRM
VQNGHFKELQSIIDMLPMSNISTEDNSQNAENCVTVSSYQKKKRQTLVFSATVALSADFR
KKLKHGTQKKQKQSLTDGLNSIETLSERAGMRPNAAIIDLTNPSILAAKLEESFIECTEE
NKDAYVYYILTVHGKGRTIVFCTSIAALRHISSVLRILGINVWTLHAQMQQRARLKAMDR
FREKENGILVATDVAARGLDIPGVKTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALIS
PRDTAKFASLCKSFSKDAFRRFPSENSYMPEVLKRLSLARQIDKITRKGSQEKAEKNWFD
RNANSVELVTENYDSEEEQVNKYKETKASSRHLKKLQEELNMLISRPLQSKTFSHRYLAG
AGITPLMQGHLQQLARQKLSDHQGSGPGKKGKLVVIGQDCVEALQALRSGGEEVRMDAKD
LAGKQRNMQNLKRKRKDEKRRLRDERRKQKRDQKQEDE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcagtagcggcagcgacaccctcttctcagagaaaggccaagaggaagtct
cgaaccctagcttccggcgaccctgagctcgagcgtctcaactcactctcatggaacccc
actttccctcaacaagatgatgacaacgatcccttttccctcttcattggctccaatgaa
ctcgaaggaggttttctttcacttgaggagattgatgaggctgattatggaatggatatt
cataaacctggaggagatgacaacaagaagcaggtggtgcctaagcagggcaaaaagttg
aagaaacagaagcatgatggggttgatggtgctcgtagtagcgacgatgtgccggaagtg
gaaaccgatggagaaatcgtgaaggatgaggaagtgaagactgaggtgaagaaaaagaag
aagaagaagaataaaaacaaggctgcgaaagaaaaccagaaactcgagccgcagccggat
actggtttagatgctgatgtgaagggtgatgttggggaagagagcattgatgagactgaa
ttttatggatggaatgagttgaggcttcatcctcttctaatgaaagcaatatacaagctt
ggcttcaaggaaccaacaccaatacagaaagcttgtattccagcagctgctcatcaaggg
aaggatgttattggggctgcagagacagggtctggtaaaacacttgcgtttggtttgcca
attttgcaacgcattttggaggagagagagaaggccggaaagatcgaagaagaaaagggt
gaaaaagctgaaaagtatgctcctaccggtcttttgaggagtcttattattgcgcctact
agagaacttgcacttcaggtcactgatcatctgaaagcagtagccaagtatattaatgtt
agggtgacccctatagttggagggattttagcagaaaaacaggagagacttttaagatca
aaacctgagattgtggtcgggactccagggaggttatgggaacttatgtcatccggagaa
aagcatctagtcgagctacattcattgtctttctttgtgcttgatgaggctgatcgaatg
gtacaaaatggtcatttcaaggagctgcaatctataattgacatgcttcccatgtccaat
atatccactgaagataattctcaaaatgcagaaaattgtgttacagtttctagctaccaa
aaaaagaaaaggcaaactcttgttttttcagcaactgttgccctgtctgctgactttcgc
aagaagctaaagcatggtacacaaaaaaagcagaagcaatcattgacagatggattgaat
tctattgaaactctttctgagcgagctggaatgagacccaatgctgcaattatcgatctt
accaatccatcaatattagcagctaagcttgaggaatcatttattgaatgcacggaagaa
aataaagatgcctatgtgtattatattctgactgtccatggaaaaggccgtacaatagtt
ttctgtacgtcaatcgcagctctgcgtcatatttcttccgtattgcgcattcttggtatc
aatgtgtggactcttcatgcccaaatgcagcaacgagcacgtttaaaggccatggaccgt
ttccgggaaaaggaaaatggcatacttgttgctaccgatgttgctgcaaggggtcttgat
attcctggtgttaaaacggttgtccactatcagcttccacattcagcagaggtttatgta
catagaagtggtagaacagcaagagcttctgctgaaggttgtagcattgctttaatctca
ccgagagatacagcaaaatttgcttcattgtgcaagtcattttcaaaggatgcctttcga
aggtttccttcagagaactcatacatgccagaggttctgaaacgattgtctcttgcacgt
caaatagacaagataacgaggaagggttcccaggagaaggctgaaaaaaactggtttgac
cggaatgccaactcagtggaattagttacagaaaattatgacagtgaggaggaacaagtt
aacaaatataaggaaaccaaagctagctctagacatttgaagaaattgcaggaggagctc
aatatgctgatttcacgtcctttacaatcaaaaacattttcacatcgatatttagcaggg
gctggtatcacacctctcatgcagggacatttgcaacaattagcaaggcaaaaactaagt
gatcaccagggttcaggaccaggcaaaaaggggaaattggttgtgattggtcaagattgt
gtggaagcacttcaggcacttcgaagtggtggtgaagaggtgcgcatggatgccaaagat
ttggcaggaaaacagagaaatatgcagaatttaaaaagaaaaagaaaagacgagaagaga
cgtttgcgtgatgagcgtagaaagcagaagagagaccaaaagcaggaggacgaataa
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