Lotus japonicus: 130746257
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Entry
130746257 CDS
T04348
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1 isoform X1
KO
K03255
protein TIF31
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lja03012
]
130746257
Translation factors [BR:
lja03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130746257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
CLU
DUF6991
Motif
Other DBs
NCBI-GeneID:
130746257
NCBI-ProteinID:
XP_057454805
LinkDB
All DBs
Position
3:79505636..79519414
Genome browser
AA seq
1837 aa
AA seq
DB search
MAPRNTRGKAKGEKKKKEEKVLPVVIDVTVNLVDETQVVLKQGISTDRTIDVRRLLTVNT
ETCHITNFSLSHEVRGPRLKDSVDVSALKPCFLTLVEEDYDEERAVAHVRRLLDIVACTT
TFGPSSTPKNAATTAPKSKPPPANPSPKDATAAAAAAAADGDGEISHSCPKLDSFYEFFS
LSNLTAPIQYVKKAARRHVEEIAEADHLFSLDVKLCNGKVVHVEACRKGFYSIGKQRILC
HNLVDLLRQLSRAFDHAYDDLLKAFLERNKFGNLPYGFRANTWLVPPIAAHSQSVFPSLP
VEDETWGGNGGGLGRDGKFDLIPWANKFSYIASMSCKTAEERQIRDRKAFLLHSLFVDVA
IFRAIRAVKHVMEEHNFSCSAAENGIIYTEKVGDLSIRILKDGSVASCKIDTKIDGVEAT
GVNQKDLLERNLLKGITADENTAAHDITTLGVVNVRYCGYVVVVKVEDGGSENNNSPSDQ
NDELFDQPEGGANALNINSLRLLLHSTTQPENNKQMTQTQMFEELSGSNAFVEKLIKESL
SKLEEEELGLDYFVRWELGACWIQHLQDQNSADKDKKPSLEKAKNEMKVEGLGKPLKALK
NNKKKSDSSNTMLASEYSKPNQEVENAPLPSIESQPDTTAADNELLLKGILSAAAFTRLK
ESGAGLHCKSIQDLINLSRKYYLDVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRMQS
LGHVVKLSEKLSHVQSLCIHEMIVRAFKHILRAVISAVVDKEKMATSIAGALNLLLGVPE
NRESDKSCELHPIVWRWLVLFLKKRFDWDLSRLNYKDVRKFAILRGLCHKVGIELAPRDF
DMDSPFPFQKSDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKL
VAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDL
AVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLH
KALKCNQRLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRTKLGPDDLRTQ
DAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNHDSKGRDAAAK
RRSQVTKVKASTYQNIDSASSDESSKEIQKEVSDEDVPIPDPGGSADSEPENNSAPDSEE
HICEKISDEKPQMSGQILSEAPADGDDGWQPVQRPRSAGSYGRRLKQKRLGKVHNYQKNV
ETSAEYPLGRSDNQNSRYYFLKKRSMYHGGSADNHAFNITQGSKFGRKVVKAVTYRVKSM
PSAPKTASDETLEIGDKQLSSHSELDSNDDHPIKTSVVSLGKSPSYKEVALAPPGTISKF
QVYNPQSEIPECREHDVGKHKEEDVEAHKSINPTPKEVNDMSQEKCDDPLSDSVDDTQDD
IVVAPEKKAESQLIEVVQENSGSAEVLESVDVDAQGTDDNSIVIDAVQNHLESYKQEPNA
TNSSGSFEPSDDTKSNSPGGDDSSSSPSHAGVIAYKKLSASAAPFNPSPAIARAAPIAMN
ITHLSGPGPVPAIGPWALNMPGPATLLPAGTPMCSSPHHAYPSPPTTPNMIQPLPFMYPP
FTQPQSIPTNNFPVSNAFHANHFTWQCNLNPAISKFGPSAVWPGCHPMEFSHPVPIVEPI
PDIISEPQVQYHAVESPRSASVLPEDIDNIGDSNKEIKALTSEASEDEVVRAGSESIKEN
GNPNFPGTENAENKPNLNIGSNGSSSSSETNMDGEKTFSILIRGKRNRKQTLRMPISLLT
RPHGSQSFKVIYNRVVRGSDAPKSINFSSSKHCTATA
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaagaaacactcgcggaaaggctaagggtgagaagaagaagaaggaagaaaag
gttcttccagttgtgatagatgtcactgtgaaccttgtcgatgaaactcaagttgttctc
aagcagggcatatcaactgatagaacaatagatgttcgtcgacttttaacagttaataca
gagacatgtcatatcactaatttctccctatcacatgaggttagagggcctcgtttgaag
gattcggtggatgtttccgcactgaagccctgcttcctcactctagtggaagaggattac
gatgaagaacgagcggtggctcacgtccgaagactcctcgacatcgtcgcctgcaccacc
accttcggtccgtcgtcgacgccgaagaatgccgccaccaccgcgccgaagtccaaacct
ccgccggccaatccgtcaccgaaagatgccaccgcggcggcggcggcagccgcagcagac
ggagacggcgagataagccactcttgccctaagctggacagtttctacgagtttttctcg
ctttcgaatctcactgcaccgatccaatatgtgaagaaagctgcgaggcgccacgtggag
gagatagcagaggctgatcatctgttttcgctcgatgtgaagctgtgtaatgggaaagtg
gtgcatgttgaagcttgcagaaaggggttttatagcattgggaagcagcggattctgtgt
cacaatcttgttgatttgttgagacagcttagcagagcttttgaccatgcgtacgatgat
ctcttgaaggcatttctagaacgcaacaagtttgggaatctcccctatggcttcagagcc
aacacatggcttgttcctcctattgcagctcattcacaatcagtttttccttctctccct
gtggaggatgaaacttggggtggaaatggtggtggtcttggaagagacgggaaatttgat
ttgattccttgggccaataaattttcatatattgcatctatgtcttgcaagacagcagaa
gaaaggcaaattcgtgatagaaaagcatttctactgcacagcctgtttgttgatgttgcc
attttcagagcaattagagctgttaaacatgttatggaagagcacaattttagctgctcg
gctgcagaaaatggaattatttacactgagaaagtaggtgacttgagtatcagaatcttg
aaagatggttctgtggcgagctgtaagattgataccaagattgatggagttgaagctact
ggagtaaatcaaaaggatttattagaacgaaatctactgaaaggaatcacagctgatgaa
aatacagcagctcatgatattaccactttaggtgttgtcaatgtaagatattgtggttat
gtggttgttgtgaaagttgaagatggaggctctgaaaataacaattctccatctgatcaa
aatgatgaattgtttgatcagccagagggtggtgccaacgcactaaacattaacagttta
agattacttcttcacagcacaacccaaccagagaacaataagcagatgactcagacacaa
atgtttgaagagcttagtggttccaatgcttttgtggagaaactgattaaagaaagcctt
tctaagcttgaggaagaggaactgggtttggactatttcgtaagatgggagcttggagct
tgctggatacaacatttgcaagaccaaaacagtgcagacaaagacaagaaaccatctttg
gagaaagctaagaatgaaatgaaggtcgagggtcttgggaaaccgctcaaggccctcaag
aataataaaaagaaatctgattcaagcaatactatgcttgcatctgaatattcaaagcct
aatcaggaggttgaaaatgctccattgccctcaattgaatcccagcctgataccactgca
gctgataatgaacttttgctaaaagggatattatctgcagcagcttttacccgattgaaa
gaatcaggagctggacttcactgcaagtctattcaagatttgatcaacttatctcggaaa
tattacctggatgttgctatccctaaactggtagcagattttggctcattggaactctct
ccagttgatggccgcaccctaactgattttatgcatactcgtggtctacgcatgcaatct
cttggacatgttgtcaagctttcggaaaagctttcacatgtgcagtcactttgtattcat
gagatgatagttcgagctttcaagcacatccttagggcagtgatttctgccgttgttgac
aaggagaaaatggctacatcaatagctggtgcattgaatttgctacttggtgttcctgaa
aatagagaatcagataaatcatgcgaacttcaccccattgtatggagatggctagtattg
tttttgaagaaacggtttgactgggatcttagcaggttaaattacaaagatgtgaggaaa
tttgcaattttacgaggcttgtgtcacaaggtgggaattgagcttgctccaagggatttt
gatatggattctccatttcccttccaaaaatctgacattgtcagcttggtcccagttcac
aagcaagcagcatgctcatctgcagatggaaggcagctcctagagtcatccaagacagct
ttagataagggaaagcttgaagatgctgttacctatgggacaaaggctcttgcaaagctg
gtagcagtttgtggtccctaccatcggatgacagcgggagcatacagcctccttgctgta
gttttatatcatactggagacttcaatcaggcgacaatttatcaacaaaaagctttggat
atcaatgagagagagttaggtctggatcatcctgataccatgaagagctatggggatctt
gcagttttctattacagacttcaacacacagagctggctctgaagtatgtgaagcgtgct
ttatatctgttgcatctgacttgtggtccatctcatccaaatactgctgcaacatacatt
aatgttgctatgatggaggagggtttaggaaatgtacatgttgctctcagatatcttcac
aaagcattaaagtgcaaccaaagattacttggtgcagatcatattcagacagctgcaagt
tatcatgcaatagcaatagcactctcattgatggaagcatacccattgagtgtgcagcat
gagcaaacaactttgcaaattctccgaacaaaacttggccctgacgacttgcgtacacag
gatgctgcagcttggcttgagtattttgagtccaaggcttttgaacaacaagaagctgct
cgtaatggtactcgaaaacctgatgcatcaatagctagcaagggtcatctaagtgtgtca
gatcttcttgactacattaatcctaatcacgattccaaagggagggatgcagcagccaag
agaagaagccaggtaacaaaggttaaggcttcaacctaccagaacattgactcagcaagt
tctgatgagtcttcaaaagaaattcaaaaagaggtttcagatgaagatgtacctatacct
gacccaggaggtagtgcagattctgagcctgagaacaactctgcacctgactcagaagag
catatttgtgaaaagatatctgatgaaaagccacaaatgtctggtcaaatactgtctgaa
gctcctgctgatggagatgatggatggcaacctgttcaaagaccaagatcagctggctca
tatggtcggcgactgaagcagaaacggcttggaaaagttcataattatcagaagaatgtt
gaaactagtgcagaataccctttgggaaggagtgataatcagaatagtaggtattatttc
ttgaagaagcggtcaatgtaccatgggggctctgcagataatcatgctttcaacatcacc
caaggctctaaatttggaaggaaagtagtcaaagctgttacatacagggttaagtctatg
ccctcagctcccaagactgcttcagatgagacattagaaattggtgacaagcaactaagt
tctcattcagaacttgattctaatgatgaccatccaattaagacttcagtagttagtctt
ggaaaatctccttcgtacaaggaagtagcattggctcctccggggacaatctccaagttc
caggtctataatcctcaaagtgagattcctgaatgccgtgaacatgatgttggaaaacat
aaagaggaagatgttgaagctcataaaagtattaatccaaccccgaaggaggtaaatgat
atgtctcaagagaagtgtgatgatcctttatcagattctgtagatgatacacaagatgat
attgtggttgctcctgaaaagaaagcggaaagtcagttgattgaagttgtacaagaaaat
tctgggagtgctgaggtccttgaatctgtggatgttgatgctcaaggaacagatgataat
agcatagtgattgatgctgtacagaatcatttggagtcttacaaacaagaacctaatgca
actaattcatctggcagttttgaacctagtgatgatacaaagtccaattcaccaggtggt
gatgattcatcatcaagtccgagtcatgccggggtcatcgcctataagaaattgtctgca
tctgctgctccattcaacccgtcacctgccattgcacgtgctgctccaattgccatgaat
ataactcatctttctggtcctggtcctgttcctgctattggcccctgggcactaaacatg
ccgggacctgctactttgctacctgcaggtaccccaatgtgttcctctccacaccacgca
tatccatcacctcccacaacaccaaatatgattcaaccattgcctttcatgtatcctcct
tttacccaacctcagtcaataccaaccaacaactttccggtcagtaatgcctttcatgcc
aatcattttacatggcaatgtaatttgaaccccgccatatctaagtttggtcccagtgca
gtttggcctggttgtcatcctatggaattttctcatccggtacctattgttgaaccaatc
cctgatatcatttcagagccacaagtgcagtatcatgcagttgaaagtccccgttcagct
tcagttctgcctgaggatattgataacataggggattccaataaagagataaaagcttta
acatccgaggcaagtgaagatgaagtggtgagagctggttcggaaagtataaaagaaaat
ggtaatccaaattttcctgggacagaaaatgctgagaacaagccaaatctaaacattggc
tcgaatggcagcagtagcagcagtgaaacaaacatggatggtgagaaaacattcagcatt
ttgattcgaggaaagagaaaccgaaagcagactctcagaatgccaataagtttgcttaca
cggcctcatggctctcagtcgtttaaggtcatatataaccgtgtagttagaggaagtgat
gctcccaagtccatcaatttctcttcaagtaaacattgtacagctactgcttaa
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