Lotus japonicus: 130746287
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Entry
130746287 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130746287 isoform X1
KO
K24155
rabconnectin-3a
Organism
lja
Lotus japonicus
Pathway
lja04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130746287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130746287
Membrane trafficking [BR:
lja04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130746287
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
130746287
RAVE complex
130746287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_EML
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_VPS8
Tla3_N
Motif
Other DBs
NCBI-GeneID:
130746287
NCBI-ProteinID:
XP_057454841
LinkDB
All DBs
Position
3:complement(79851579..79869345)
Genome browser
AA seq
2551 aa
AA seq
DB search
MIHTENTETTTSSSPNMNTNNNKSIIINHLPLNLLRSEVVTPAPTFSDSTIDFLPHFAGY
SWLAYGASSLLVITHFPSPLSPHQTRFGPIFRQVFELSADHSSPVAAVSWCPDTPSSGDL
AAAAENCIWVFNHDSATSNGSFCWSQNAVLVQQTKVGAIRWTGSGDGIISGGMEVVFWKR
INKCWEIAWKFKADQPQTLVSATWSIEGPSATAAHPSKEQIGGSLISEVSKCVLVCQSNG
LSEYSKVKLHHPLPVVMIQWRPSRGKLNRYGRNSIKNVLLTCCLDGTARLWSEIDNGKVR
RAGKDINDQKNTGCSFCAVAVIEINQTLNGVLGSDIFVSWGMEIEGIFRAGERIKQVFSK
EGSEHDVRKCDWLVGFGPGMLLSFWAVHCLDDVSPLRFPRVTLWRRIELQNQDIENVFKF
DLSNFRNALVLHKVNTLRNCLSGPPMICSPLQLLPCNSLVWSFFHIQTLHDTVENSCDND
DTDNISSRLIGGVLNLDGHSGKILKVSIHPYICKVQFAASLDSNGLLLFWSLSNISNSIL
GCPTLVPTWELLGKLATQDSCSKYTSLTWAPSIVGDKLVFFMGHTRGVDCFIVNISRTEE
ENIECHYLCTIPFSGHGPYEDGPSDIFAIPLTSTCNKTLCRNKLMLLAVWMGKFQALSWE
VNMHSFDISTSCCECNFDSNSLDDCSVWAFQSTFANKRYCVTVIPCSSEFPSSDDMVTSF
AVADSGTLSCKQQEFGFASDLCSSYPTYIMATGCFDGSLKLWKSNPGTPSTLHLPWELVG
MFVAHDGPIKGICFADCGKKIATFCNKNKSNAVNTIHIWDAVNLITTGTFILEDKLTPES
DVITLKWLALGTGDLLLGVCLQNGLHVYAQKHYDGLNLSNSVSFPKMNLWVRIAFAHTDI
PIYDFVWGPRAAAVVIHGNYFSIFSHWLFYMDKKQKSNFHPCHSEPNAYNCKGEIYEDIL
SAVFTDGDTGDFRELSTGDSPADCDSKQSIKINIKDHNLSSSLFLAKEQLKSEPLTMVGL
WSILEVAEIISGSLPTYHPDVLHTNISSGNWKRAYVALRHLVECLASNYDPQKKHISKRN
ALPNIILSYYFEGRILESSQDKGFHWSGDVSSMSSISQAPYYSGSSAENNSIPTSTRSEL
NGFIESLEKFPDIPLWINIEKTQILAIIDLLSEVCSSDSSSAYQSLDEPGRRFWVSLRFQ
QLLFQRKFARAASFEELLVNSRLFVWAYHSDCLENLFGSVIPNEPSWQEMRALGMGFWFA
SIPQLRARMEKLARAQYLKSKNPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSR
NFQEEKNKAAALKNAYVLLGKHQLELAIAFFLLGGDHSSAINVCAKNLGDEQLALVICRL
LEGHGGPLEHHLITKYILPSAIDKGDYWLSSLLEWEMGNYYQSFYRMLEFSVNPVAQEST
IMSNCGPFLDPTVGSYCQMLASKNSMRNAVGEQNSAILLRWATLMTVTSLKRCGNPLEAL
EYFSSSLSMLGTADQENELGDGHVVISSTLKPLPRKSSNWLSTDVSVHLEFHIKLNLALC
YLSKLIREHPSWPDTASESDGEASCSDEYMLQYEKSVESFKQRLYKGLAVFEQRFLLAPS
CLISMVLLLLCHHGLLFIGHDMTDGCTQEEMSQKKSDIFDVFNLYHSPFKPFFKTAEEIS
FLYSRLFSACSMEYSQRSSTPLEKDESKFLDSSHSHFEGLLVSLWYLRASLRTQLSSVSK
DFIKKHVDILDYFEYYLYFSLAWLQKNSEALLLMVHPFLIENADGHNPYEIDMVNLKKLI
PKIAQLLAQNSSVTNMENLQVSKCEEDKLVADVKHLVPDDERWKILGTCLWQHMSRFMIS
NLNLVLAKIEDDNLSGTFHKKHAYRELALINMDYDSISLPEKIQLVSFCLCDFLMTTVTH
ISSYHVKQLVEILWQKLEHDSNVMTLKWLKQTTASEYSHDRNLDILELVNRKDKCLAHQL
LWDHCADPKLISDCFAQEKLDWSKDLDHKPTKGWNDLYIIMTGLHKTDDSRGDECKLSTG
SSNHEVGSPVKGMFLSDHASARSNQKDITSMNIAVFQSPREMYKRNGELLEALCINSTDL
QEAAAASNRKGIVFFHLEDEVPLSGESDLLWTKADWPQNGWAGSESTPAPTCVSPGVGLG
SKKGAHLGLGGATVGVGSSAWPSRDLTGGGALGMLGYAGVGASGLGWEIQQDFEDFVDPP
ATLENTSTKAFSSHPMRPFFLVGSSNTHIYLWEFNKDKAAATYGVLPAANVPPPYALASI
SAVQFDHVGHRFASAASDGTVCTWQLEVGGRSNVRPTESSLCFNGHASDVTYFSSSGSIV
AVAGYSSNNVNVVIWDTLAPPATSRASILCHEGGARSISVFDNHFGSGSVSPLIVTGGKG
GDVGVHDFRYIATGKAKRHRRADSGGQSSITSLNYEKDQNIDGMLWYIPKAHSGSVTKIV
AIPDTSLFLTGSTDGDVKLWDAQSTKLIHHWPKIHDKHTFLQSTSRGFGGIVRAAVTDIQ
VVPHGFLTCGGDGTVKLVRLNSHLHGYGGEL
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atgatacacacagagaacacagagacaacaacctcttcttctccaaacatgaacaccaac
aacaacaagagcatcatcatcaatcatcttcccctcaatctcctcagatccgaggtggtc
acacccgcccccaccttctccgattccaccatcgatttcctccctcactttgccggctac
tcatggctcgcgtatggagcttcttccctcctcgtcatcacccacttcccttctcctctc
tcccctcaccaaacccgctttggacccattttccgtcaagtcttcgagctctccgcagat
cactcttcacccgtcgctgctgtctcctggtgccccgacaccccctcctccggtgacctc
gctgccgctgccgaaaattgcatctgggttttcaaccatgattctgccacgtctaatggt
tctttttgttggagccagaatgcagtgcttgtacaacagacgaaagtgggagccatcaga
tggacaggatcaggggatggaattatatctggtggaatggaggtagtcttctggaaaaga
attaacaagtgttgggaaattgcttggaagtttaaagcagatcaaccccaaactcttgtt
agtgcaacatggtctattgagggcccttcggcaactgcagcacatcctagtaaagaacag
attggaggctccttaatcagcgaggtgagcaaatgtgtattagtatgccaaagcaatggg
ctatctgaatattcaaaagtcaaactgcatcatcctctacctgttgtaatgattcaatgg
agaccatcaaggggaaagctaaacagatatggtaggaattcaataaagaatgtattactc
acttgctgcttagatggaactgcaaggttatggagtgagattgataatggaaaggtcaga
agggctgggaaggacatcaatgatcagaagaacacagggtgctctttttgtgctgttgct
gttattgagattaatcagaccttaaatggagttcttggttcagatatatttgtgtcatgg
gggatggaaatcgagggaatatttagagcaggtgaaagaatcaaacaagttttttccaaa
gaaggatctgagcatgatgttagaaaatgtgattggttagttgggtttggtcccgggatg
ttgcttagcttttgggctgtccactgtcttgatgatgtttccccgctgagattcccccga
gttacattgtggaggagaattgaactccaaaaccaagacatagaaaatgtttttaagttt
gacttatctaattttagaaatgcattagttttgcataaagtcaatacactgagaaactgc
ttgtctggcccccctatgatatgctctccactgcagttattaccttgtaattccttagtt
tggtcatttttccatattcaaacattgcatgatactgtggagaactcctgtgataatgac
gatacagataacatctcctctcgtttgattggtggagttttaaatttagatggacacagc
ggaaaaattttaaaggtttcaattcacccttatatatgcaaagttcaatttgctgcttct
ctggattctaatggactgctgcttttttggtcactatctaacatttcaaacagcattttg
gggtgtccaactttggttcctacttgggaactccttggaaagcttgcaactcaagactca
tgctccaagtatacaagcttgacatgggcaccttcaatagttggtgataaactggttttt
tttatgggacataccaggggggttgattgcttcatagtcaacattagtcgaaccgaggaa
gaaaacatagaatgtcactacttatgcaccattcctttcagtggccatggtccttatgag
gatggcccatctgatatctttgcaatacctctgacttctacttgcaataaaacattatgt
agaaataaacttatgctattggcagtttggatggggaaatttcaggccctatcatgggaa
gttaacatgcactcttttgacatatcaacaagctgttgtgaatgcaattttgattctaat
agccttgatgactgcagtgtttgggcatttcaaagtacatttgctaataaaaggtattgc
gttactgtaattccatgttcatctgagtttccaagttctgatgatatggttactagtttt
gctgtagctgattcaggcactctgagttgtaaacaacaggagttcggttttgcaagtgat
ctttgcagtagttatcctacatatatcatggccactggctgctttgatggtagcttaaaa
ctttggaaaagtaaccctggaaccccgtcgaccctgcacttgccatgggagcttgtgggt
atgtttgttgcacacgacggtcctatcaagggcatatgtttcgctgattgtggtaaaaaa
attgctacattctgcaacaaaaacaaatcaaatgctgtcaataccatccatatatgggat
gctgtaaatctgatcaccacagggacttttattttggaagataaactaacacctgaaagt
gatgttattactctgaagtggttagctttagggactggtgacttattgcttggagtttgt
ttgcaaaatggattgcatgtatatgctcagaagcattatgacggtctgaatttgtccaac
tctgttagttttccaaaaatgaatctatgggttcgcattgcatttgctcacactgacatt
ccaatttatgattttgtgtggggacccagagctgcagcagtggtaatccatggaaattac
tttagtatattcagtcattggttgttttatatggataagaagcaaaagagtaattttcat
ccttgtcattcagagccaaatgcctataattgcaaaggtgaaatatatgaagacatactt
tctgcagtttttactgatggcgacactggtgacttcagagaactgtcaacaggagacagt
cctgcagattgtgattccaagcagtccatcaaaataaatatcaaggaccataacctatcc
agtagcttgtttctggccaaggaacaattaaaatctgaacctcttaccatggttggttta
tggagcatcttagaagtagctgagataattagtgggtctttgcctacttatcaccctgat
gtactacatacgaatataagttcaggcaattggaaacgtgcttatgtagctctgaggcat
cttgttgaatgtctggcttctaattatgatcctcaaaagaaacatatctccaaaagaaat
gctcttccaaatatcatattgtcatactatttcgaaggccgtatattagaaagttcccaa
gataagggattccattggagtggggatgtttcttcaatgtcatcaatttcacaggctcca
tattattcaggttccagtgctgaaaataacagcattcccacctcgacaagatctgagcta
aatggctttattgaatctcttgagaaatttcccgatatacccctttggatcaacatagag
aagacacagattcttgcaattattgatctgctaagtgaagtttgtagctcagactcatct
tctgcatatcaaagtctcgatgaacctgggcggaggttttgggtttccctcaggtttcag
caactgctttttcaacggaagtttgctagagctgcatcttttgaagagttgcttgttaac
tcaaggttgtttgtgtgggcttaccactctgattgcctagaaaatttattcggttctgtc
atacctaatgaaccatcatggcaagaaatgcgtgctttgggtatgggcttttggtttgct
agcatacctcagttgcgtgcaaggatggagaaattggcaagagcacagtatttgaagagc
aaaaatcctaaggattgtgccttgttgtatattgcattgaacagaattcaagttttggct
ggccttttcaaaatcagcaaggatgagaaggacaagcctttagtgggttttctttcacgc
aattttcaggaagagaaaaataaagctgctgctttaaaaaatgcttatgtcttactggga
aagcatcagctggaattagcaatagctttctttttgcttggaggtgatcattcgtctgct
ataaatgtttgtgctaagaaccttggggatgaacagcttgcactagtcatttgtcgccta
cttgagggccatggtggaccactggagcatcacctaattacaaagtatatacttccatct
gcgattgataaaggagactactggctttcaagccttctggagtgggaaatgggtaattat
tatcaatctttctatagaatgctagagttttctgtgaatcctgtggctcaagagtctacc
atcatgtccaattgtggtccttttctagaccctactgttggttcttattgccaaatgcta
gcatcaaagaatagcatgcggaatgctgtaggggagcagaattctgccatccttttaaga
tgggcaactttgatgacagttacttccctaaaaagatgcggtaatcctcttgaggcattg
gagtatttctcatcttcactgagcatgcttgggactgcagatcaagagaatgaattgggt
gatggacatgttgtgatatccagtacattaaagcctttgccaagaaaatcctctaactgg
ttgtctactgatgtatctgtgcatctggagtttcatattaaattgaatttggcactttgc
tacttatctaaattgataagagagcatccaagttggcctgacactgcttcagaatctgat
ggggaagcctcttgttctgatgagtacatgttgcaatatgagaaatcagttgaaagtttt
aaacaaaggttatacaaagggcttgctgtatttgaacagaggtttttattggctccgagc
tgcctaatcagtatggttttactcttactttgccatcatggattattgttcattggtcat
gatatgacagatggatgcactcaagaagaaatgtctcaaaagaagagtgatatatttgat
gttttcaatttatatcactctccgtttaaacccttctttaagactgccgaagaaatctcc
tttttgtattcaagattgttttctgcctgcagtatggaatattctcaacgaagttcaact
cctcttgagaaagatgagtccaagtttttggattcttcacattctcactttgaaggtctt
ctggtttcattgtggtacttaagagctagtttgaggacccaattgagttctgttagcaaa
gattttattaaaaagcatgttgatatccttgattattttgagtactatttatatttttca
ttagcttggcttcaaaagaactcagaagctcttttattgatggtgcatcctttcttgatt
gaaaatgctgatggccataatccttatgagattgatatggtgaatctgaagaagcttata
ccgaaaattgcacagttgttggctcaaaattcttccgtaactaatatggaaaacctccaa
gtttccaaatgtgaagaagataaactagttgcagatgtaaagcatttggttcctgatgat
gaaagatggaagattttagggacctgcttgtggcaacatatgtctagattcatgatatct
aacttgaatttggttcttgctaaaattgaagatgataatttgtctggcactttccacaaa
aaacatgcttatagggagttggcactcattaatatggattatgatagcatcagcttgcca
gagaagattcagttagtctcattttgcttatgtgatttcctgatgacaacagttactcac
atttcttcttatcatgttaaacaacttgtggaaattttgtggcagaaattggagcatgat
tcgaatgtaatgacccttaaatggctaaaacaaacaacagcatcagaatacagtcatgac
agaaacctggacatattggaactggtgaacaggaaagataaatgtttagctcaccagtta
ctatgggatcactgtgctgatcccaaattaatatctgattgctttgcacaggaaaagctc
gattggtcaaaggatttggaccataagcctactaaaggatggaatgacctgtatataatt
atgacaggactacataaaactgatgattcacgtggtgatgaatgtaaactaagcactgga
tcttctaatcatgaagtcggatctcctgttaaaggaatgtttctaagtgatcatgcttct
gcaagatccaaccagaaagatattactagtatgaatattgcagttttccagagtcccaga
gaaatgtacaagagaaatggagaacttttggaggcattgtgtataaactctactgatctt
caggaagctgcagctgctagcaaccggaagggtatagtattctttcatctggaagatgag
gttcctttaagtggtgaatcagaccttttgtggaccaaggctgattggccacaaaatgga
tgggcaggttcagaatccacacctgctccaacatgcgtttctcctggtgttggccttggg
agcaagaaaggggcacacctcggtctaggtggagcaactgttggtgtgggttcttcagct
tggccaagtagagacctgacaggtggtggagcattaggaatgctaggttatgctggtgtt
ggtgcctctggattgggttgggaaattcaacaagactttgaagattttgttgatccacct
gccactttggagaacacaagtacgaaggctttctctagtcatccaatgaggcctttcttc
ttagttggttcaagcaatacacacatttacttgtgggagttcaataaggataaagctgct
gctacatatggagtgctgcctgctgccaatgtccctccaccttatgctcttgcgtcaatt
tcagctgtacagtttgaccacgttggacaccggtttgccagtgctgcatcagacgggact
gtctgcacatggcagctcgaggttggaggaaggagcaatgttcgcccaacagaatcatcc
ctctgctttaatggtcatgcatcggatgtcacgtacttttcttcaagtggatcaattgta
gctgtggctggatatagctctaataatgttaatgtggtgatatgggatactttagctcca
cctgcaacttctcgagcttccattttatgtcatgaaggtggtgcacgctccatttctgtg
tttgataatcatttcggaagtggttctgtttcccctcttatcgtgaccggtggcaaaggc
ggtgatgttggagttcatgacttccgctatattgctactggaaaagctaaaaggcatagg
cgtgctgatagcggtgggcaaagctccatcacatctttgaattatgaaaaggaccagaat
atagatgggatgctttggtatatcccaaaggcccactcaggaagtgtcacaaaaatagtt
gccatcccagacaccagcttgtttttgactggaagcacagatggagatgtcaagctctgg
gatgcccagagcacaaagttgatacatcactggccaaagatacatgacaagcacaccttt
ctgcagtcaacctctcgcggattcggtggcattgttcgggctgctgttacggacatacaa
gttgttccccatggttttcttacttgtggtggggatggaacggtaaagcttgtgcggctg
aacagtcacctgcatggctatggaggggagttatga
DBGET
integrated database retrieval system
