Lotus japonicus: 130746339
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Entry
130746339 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130746339 isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
lja
Lotus japonicus
Pathway
lja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130746339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130746339
Membrane trafficking [BR:
lja04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130746339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR5
WD40_CDC20-Fz
WDR55
WD40
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_THOC3
TPR_VPS8_2
WD40_Gbeta
Beta-prop_TEP1_2nd
INTS5_N
Beta-prop_Aladin
Beta-prop_HPS5
zf-RING_Vps41
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
130746339
NCBI-ProteinID:
XP_057454916
LinkDB
All DBs
Position
3:80615813..80633398
Genome browser
AA seq
1896 aa
AA seq
DB search
MQSNLNMSSTQHPTTAESTSMELDLRSFIPSLAADTDDADDGPHRTIDEILNECDTSSSS
SSPSPPSSPSQTSNTNSQPEPVPFSRVKPAQFPNPTRAPRPFSSLLDRIRPNAKPGAALA
AAAAASRAVPTPHAAAIISRRKVVADLGSSIAGDDDGGSDVSSKGELGEKIDRKVENIDN
KIEGSESEGFSSADAEIATEVEELKDGSADIQVHTDSSLVSEEKSDLDEFPENDIDSAPF
DDVGGSGEKGIVDFVDVGEKGITEAEELVSGSGFVEEGIRNEVSDGGGDDDDSSIGDVDV
SELVEERLEELESRMVADRAEKKQESSKKPLELAEELEKKHASTGLHLEEGAAAQPMRLE
GVRRGSTTLGYFDVDADNAVSRVISSHTFRREHGSAQVLAVHANYIAVGMAKGLIVVVPS
KYSIHHADNTDGKMLMLAIQGDRSHAPVTSMSFNQQGDLLLAGYGDGHVTFWDVQKGVVA
KVINGEHTTPVVHILFLGQDPQNNRQFKAVTGDCKGLVLLHSISVVPLLNRFNIKSQCLL
DGQRTGLVLSASPLIFDEFSGSASPYSQGNTMVSASGISSMMGGVVGGDAGWKLFNEGSS
LVEEGVVVFVTHQTALVVRLSPKLEVYAQISRPDGIREGSMPYTAWKYMAQTSSSSENMS
TETTARVSLLAIAWERKVQVAKLVKSELKVYGKWSLDSAAIGLAWLDDQMLVVLTSTGQL
YLFAKDGTVIHQTSFAADGIGGDDLVSYHTHLINIFGNPEKAYHNSVAIRGASIYVLGPA
HLLVSRLLPWKERILVLRKAGDWMGALNMAMTLYDGHAHGVVDLPRTLDAVHEAIMPFLV
ELLTSYVDEVFSYVSVAFRSQIGKLDQSNNSNNRSNSVHSEIKEQYTRVGGVAVEFCCHI
KRTDILFDKFFSKFVDVQQRETFLELLEPYILKDMLGSLPPEIMQELVEYYSTKGWLQRV
EQCVLHMDISSLDFNQVVRLCREHGLYSALVYLFNKGLDDFRAPLEELFAVLQNSQKEIA
IALGYRMLVYLKYCFTGLAFPPGHGTISSKRLPSLRKELVEFLLEDSRSLKPQTVSDITS
RKPYLYLYLLLELDTEATLDVLRRAFVEDEISNACSSSPDSVDGPIEEAQKENNVAETQN
TLVQNTVDALIQIIDMNIVPTDTTSFSADNELMKEWPSKDIGYMFEFIAYYVALQRAKVS
KGVLCQMLEYLTSDNHFSNNVSVDSSSPKIREKQVLSLLEVLPESEWDASFVLELCESAK
YHQVCGLIHTIRHEYVAALDSYMKDVDEPVHAFSFINKVFSELTDKDHTAIRSAVLSRIP
DLVELSREGAFHMVISHFSDESSRIISELHSHRRSLFLYLKTLIELHLFGTLDLSNMRKV
DIMNPCNGKQVMDLPQEVRYYLENISHFPKYMRENPIQVSDDLIELYLELLCQYEGGSVL
KFLETFDSYRVEHCLHLCQEYGIVDAAAFLLERVGDVGSALLLTLSDLNGKFVELDAAVE
AVVLNHRKGGSSHMEVFNKVLTTKEVNDIHNLLHACIGLCQRNTPRLNPEESEAHWFKLL
DSFCDPLMDSYAEDRARERNNYSGMLTGSVDSHLDKDTHKSNWKISMSRNGHILRKLLSQ
FIKEIVEGMIGFVHLPTIMAKLLSDNGSQEFGYFKLTILGMLGTYGFERRILDAAKSLIE
DDTFYTMSLLKKGASHGFAPRNLVCCICNCLLTKNSVSSGIRIFNCGHAIHLQCEGSEAE
SSSKGSSSGCPVCLPSQKSKQSRNKLVMAENGLVNKFSSRRQHPHGSTIYLHDNDFSEST
YGQQQISRFEILNSLQKNQRFMQIENLPQLRLAPPAVYHEKVSKVTDFLTGESSNRSAAT
EKQSRNKQNRELRVKGSSIRFPLKSSIFGKEKTNKR
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaacttaaacatgagttctactcagcacccgacgacagctgaatcaacttcc
atggagctcgacctccgctccttcatcccttccctcgccgccgacaccgacgacgccgac
gacggccctcaccggacaatcgacgaaatcctcaacgaatgcgacacatcctcttcctca
tcatcaccctctcctccctcttctccctcacaaacttcaaacaccaattcccaacccgaa
cccgttcccttctcccgggtcaaacccgcccaattccccaaccctaccagagctccgcgc
ccattctcctcccttttggaccgaatcagacccaacgctaagcccggcgcggccctcgcc
gccgctgctgccgcctcccgagccgtccccactccccatgccgccgcgatcatctcccgg
aggaaagttgtcgccgatttggggtcctcgatcgccggcgatgatgatggtggttctgat
gtttcttcaaagggggaattgggcgagaaaatcgataggaaagttgagaacattgataac
aagattgagggaagtgagagtgagggtttttcttctgctgatgcagaaattgcaactgaa
gtggaagagttgaaggatggtagtgctgacattcaggtgcacactgattcttctcttgtg
agtgaggagaagagtgatttggatgaatttcctgagaatgatatagattctgcacctttt
gatgatgttggtggtagtggtgaaaagggtattgttgattttgttgatgttggtgaaaag
gggatcactgaagcagaagagctagtgagtggtagtggttttgtggaagaaggtattagg
aatgaggtgagtgatggtggtggtgatgatgatgatagttcaataggtgatgttgatgtt
tcggagctggtggaggagaggcttgaggaattggaaagcagaatggttgctgatagagca
gagaaaaaacaagagtcttcaaagaagccacttgaattggctgaggagctggagaagaaa
catgcttcaactggtttgcatttggaagagggtgctgcagcccagccgatgaggctagag
ggtgttcggagggggtccacaacattgggatactttgatgttgatgctgataatgctgta
tcaagggtcatttcatcccataccttcaggcgtgagcacggttctgctcaagtcttggca
gttcatgctaattacattgcagtaggaatggccaaaggtctaatagttgtagtgccaagt
aaatattccattcatcatgcagacaacaccgatggaaagatgttgatgcttgctatacaa
ggtgatcgctcacatgctccagtgacatccatgtcttttaatcagcaaggagaccttctt
ttagctggttacggagatggtcatgttacattttgggatgtacagaaaggtgttgtggca
aaagttattaatggagagcatacaacacctgtagtacatatattgtttctagggcaggat
cctcagaataatcgtcaatttaaagctgttactggtgattgtaagggtctggttctcttg
cacagtatctcagtggtccctttgcttaatagattcaacatcaaatctcagtgtcttctt
gatgggcaaagaacgggtttggtgctatcagcttcaccactcatttttgatgaattcagt
ggaagtgcctcaccttattctcagggaaacaccatggtctcggccagcggtataagtagc
atgatgggaggtgttgttgggggagatgcaggttggaaactcttcaatgaaggctcttct
ttggttgaagaaggtgtggttgtatttgtcactcatcaaactgccttggtggtacgcctg
agtcctaaattggaagtctatgctcaaatctctaggccagatggaattcgagagggttcc
atgccatatactgcatggaaatacatggcacaaacaagtagttcttctgaaaatatgtcc
acagaaactactgcaagagtttcattgcttgcaattgcttgggaacggaaagttcaggtt
gcaaaattggtcaaatcagaattaaaagtatatggaaaatggtctcttgacagtgcagct
ataggtctggcatggttggatgatcagatgctggtagttctcacttcaactggacaactg
tatttatttgccaaggatggaactgtgattcatcaaaccagctttgctgcagatggtatt
ggaggagatgatctagtttcttatcatacacacttgatcaatatatttgggaaccctgag
aaagcttatcataactctgttgctataagaggagcttctatttatgtacttggtccagca
catcttcttgtttcccgtcttctcccttggaaagagcgtatcttggttttacggaaagcg
ggtgattggatgggtgccttgaacatggcaatgactctttatgatggccatgctcacgga
gttgttgatcttcctagaaccttggatgctgtacatgaggccataatgcccttcttggtg
gagttgcttacatcatatgtagatgaagttttctcctatgtttcagtcgcattccgcagc
caaattggaaaactggaccaatccaataattcgaataatagaagcaattcagtgcattct
gagataaaggagcaatacacccgtgttggtggagttgctgttgaattttgttgtcatatc
aaacggacagacattctttttgataaatttttttccaagttcgtggatgttcaacagaga
gaaacatttttggagcttctggagccatatattttgaaggacatgcttggatctctacct
cctgagattatgcaagaactggtagaatattatagcaccaaagggtggttacagagagtt
gagcaatgtgtacttcacatggatatttcatccttggattttaatcaggttgtcagatta
tgccgggagcatggactatatagtgccctagtgtatctcttcaataaaggattagatgat
tttagggcacctctggaggagctgtttgcagtcttgcaaaatagccagaaagaaattgct
attgcacttgggtatagaatgctagtttatctcaaatactgctttacaggtcttgccttt
ccaccaggccatggaactatttcttctaaacgcttgccatctcttagaaaagaacttgta
gagtttttgttagaggactccagatctctgaaaccacagacagtgtcagacattacatcc
agaaagccatacctatatctttatcttttgttagagttagacactgaagcaacattagac
gtcctcagacgtgctttcgtggaagatgaaatttcaaatgcctgctcgtcttcaccggat
tcagtcgatggacctattgaagaagcacaaaaagaaaataatgttgctgaaactcaaaat
actttagttcagaacacagtagatgctctcatacaaataattgatatgaatattgttcca
actgatacaacctctttcagtgctgataatgagttaatgaaagagtggccttcgaaggac
ataggttatatgtttgagttcattgcatattatgttgctctccaaagagctaaagtttct
aagggtgtgctgtgtcaaatgttggaatatttgacatcagataatcacttttcaaataat
gtttctgttgatagttcaagcccaaaaattagagagaagcaagtgctttctcttctggaa
gtacttccagagtcagaatgggatgcgtcatttgtgctagagctatgtgagagcgccaaa
tatcatcaggtttgtgggttgattcataccatcagacatgagtatgtggctgcattggat
agttatatgaaagatgtagatgagcctgttcatgccttctcctttatcaacaaagtgttc
tcagagttgactgacaaggaccatactgctattcgatcagcagtcttatccagaattcct
gatttggttgaactaagcagggaaggagcattccatatggttatcagtcattttagtgat
gaaagttcccgtatcatctctgaactccattctcatcgaagaagtcttttcctttattta
aagacactcattgagcttcacttatttggcacgctagacttgtctaatatgagaaaggtt
gatattatgaatccctgtaatggaaagcaagttatggatctcccacaagaagtccgttat
tacttagagaatatatcccattttcccaagtacatgcgtgaaaatcctattcaagtgtct
gatgatcttattgagctttacctagagttattatgccagtatgaaggtggttcagttctc
aagtttctggaaacatttgatagctatcgcgtggagcattgtttacacctgtgccaagaa
tatggcattgtagatgctgctgctttcttattagaaagggttggtgatgttggtagtgct
cttctacttacactttctgatctgaatggtaaatttgttgagcttgatgctgctgtggaa
gctgtagttttaaaccatcgcaagggtggttcttcccatatggaagtattcaacaaagtt
ttaacaacaaaagaggtgaatgacatacacaatttattgcatgcctgtattggtctgtgt
cagcggaacactcctcgtctaaatcccgaggagtcagaggcacattggtttaaattactt
gactcgttttgtgacccactgatggattcatatgctgaagacagagcacgtgaaagaaat
aattattctggaatgctaactggatcagtggattcgcacctggacaaagatacacataaa
agcaattggaaaatttcgatgtctcgaaatggtcatatcttgagaaaattgctttcccag
ttcattaaagagattgtagagggaatgataggttttgttcaccttccgactatcatggcc
aaactcttgtctgataatggtagtcaagaatttggctattttaaacttaccatattgggc
atgctgggaacatatggctttgaaagaagaattctggatgctgccaaatccttgatagag
gatgatacattttataccatgagtttactcaaaaaaggggcctctcatggatttgctccc
aggaatttagtgtgctgtatttgtaattgcctccttacaaagaactcagttagctctgga
attcgaattttcaactgtggccatgcaatccacctccaatgtgaaggttcagaagcggag
tcatcaagcaaaggatcttcatctggttgccctgtatgtttgcctagccagaaatccaag
cagtctagaaacaaattagtcatggcagagaatggattggtcaacaaattctcatcaaga
cgccaacaccctcatggaagtactatttatctacacgacaatgatttttcagagagtaca
tatggacagcaacagatatcacggtttgagatattgaacagcttgcagaaaaatcagaga
tttatgcaaatagagaacttgcctcagttgaggcttgctccacctgctgtgtaccatgaa
aaggtaagtaaagtaacagactttctgactggagaaagcagcaatagatctgcagccacc
gagaaacaaagtagaaacaagcagaaccgagagctgagagttaagggttcatcaattcgg
tttcctttaaaatcaagtatattcggaaaagagaagacaaataagcggtga
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integrated database retrieval system
