Lotus japonicus: 130746433
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Entry
130746433 CDS
T04348
Name
(RefSeq) oligouridylate-binding protein 1B-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130746433
03041 Spliceosome [BR:
lja03041
]
130746433
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130746433
Spliceosome [BR:
lja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130746433
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
130746433
NCBI-ProteinID:
XP_057455042
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All DBs
Position
3:complement(81558924..81564355)
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AA seq
418 aa
AA seq
DB search
MQNHRLKQQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGN
IHTQVTELLLQEVFAGTGPVEGCKLFRKEKSSYGFIHYFDRRSAALAILTLNGRHLFGQP
IKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR
GFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGAGGNEEKQNSDTKSVVELTNGS
SEDGKEISNSDAPENNPQYTTVYVGNLGSEATQLDLHRHFHALGAGVVEEVRVQRDKGFG
FVRYSTHAEAALAIQMGNTQSILCGKQIKCSWGSKPTPPGTASNPLPPPAPATLPGFSAT
DLLAYERQLAMSKMGGVHALMHPQGQHPLKQAAIGASQAIYDGGFQNVAAAQQMMYYQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatcacaggttgaagcagcagcaacagcaagctcttatgcagcaagcgcttctc
caacagcaatctctctaccaccctggtctccttgctcctcctcagattgaaccaatccca
agtggaaatctgcctcctggttttgatccaagtacttgccgcagtgtgtatgtggggaac
atccacacacaggtaactgagctgcttttgcaagaagtttttgcaggtacaggccctgtt
gaaggttgtaaacttttcagaaaggagaagtcatcctatggattcattcattacttcgat
cgtagatctgctgctcttgccatattaactctcaatgggaggcatctatttgggcagccc
atcaaagttaactgggcatatgctagtggtcagagagaagatacatcaggacactacaac
atatttgttggtgatcttagtcctgaggttactgatgctacgctgtttgcatgcttttct
gtctaccccagttgttctgatgcaagggttatgtgggatcagaagactgggcgttcgagg
ggatttggatttgtttcatttcgtagtcaacaggacgcacaaagtgctattaatgatttg
actggaaagtggcttggaagtagacaaatacgctgcaattgggcaacaaaaggtgctggt
ggcaatgaagaaaagcaaaactcagacaccaaaagtgtggtagaactaactaatggttca
tctgaagatggtaaagaaatatctaacagtgatgctcctgagaacaatcctcaatatact
actgtttatgtgggtaaccttggttcagaggcaacacagctcgatctccatcgccacttc
catgctcttggagctggagtagtagaggaggttcgtgtccagcgtgacaaagggtttggt
tttgtgaggtacagtactcatgctgaagcagctctagctattcagatggggaatactcag
tctattctctgtggcaaacaaattaagtgctcatggggcagcaagcccactccacctgga
actgcttcaaatcctcttcccccacctgctcctgcaactctgcctggcttctctgcgact
gatcttctggcgtatgagcgacagctagcaatgagcaagatgggtggtgtccatgccttg
atgcacccccaagggcagcaccctcttaaacaggcagcaattggagcgagccaggcgata
tatgatggtgggttccagaatgttgcagctgcacagcaaatgatgtactaccagtga
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