Lotus japonicus: 130746664
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Entry
130746664 CDS
T04348
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lja
Lotus japonicus
Pathway
lja03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130746664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130746664
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
130746664
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
130746664
NCBI-ProteinID:
XP_057455343
LinkDB
All DBs
Position
3:84477392..84483231
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AA seq
680 aa
AA seq
DB search
MARNKEALLLLLDVGPTMHSVLPEIEKVTSLLVQKKLIYNKYDEVGIVLFGTEDTDNELT
TEVGGYDHVVVLKNIKVVDGDIVEALQQLPRGTSNGDFLDAVIVGLDMLIKKFGETNKGK
KRVCLITNAQCPIKYPFEGTKEEQVTAIAKQMTIHGMKMESIILRGKISQDGNKRTMDEN
DRLLNIFAEETSTRLLYVENPISLFGAIKTRTITPVTVFRGDLELSPKLRIKVMVYKKTA
EEKFPTLKRYSDKAPLNDKYATHEVKVEYEYKSSEDPDKVIPPDQRIKGYRYGPQIVPIS
STEWEAVKFKTEKGVKLLGFTDSSNVLRHQYMKDVYVFIAEPENTKAILAVSALARAMKE
MNKVAILRCVWRQGQANVVIGVLTPNLSDGDNIPDSFYFNVLPFAEDVREFQFSSFTNFP
ASCQPNEQQLESAANLVKMLDLAPQGKEEVLRPDFTPNPVLERFYRFLEVKSKHPDAAVP
PIDDTLKKITEPDADLVLQNQSVIDAFCRSFELKENPLKKRRLLQENISSSMDEEGKGNI
TAQPANLIESVKVENIGDVTPVQDFEAMISRRDSPEWVVKAIKDMKNKIFDLVEDSNDGD
NYPKALECLVVLRKGCILEQEPKQFNDFLKHLCNFCREKNLDGFCEYLASKELTLISKTE
AADSEVTDDEARSFLVKSET
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtaacaaggaagcgttgcttttgctgcttgatgttggcccaaccatgcactcc
gttcttcctgaaattgagaaagtgacttccttgcttgtacagaagaagctgatctataac
aaatatgatgaagtgggaattgtcttatttggaacagaagacactgacaatgaactaact
acagaagtgggtggatatgaccatgttgtggttttgaaaaatattaaagtggtcgatgga
gatattgttgaggccttgcaacaactgcctcgaggaacctctaatggtgattttcttgat
gctgtcattgttggcttggatatgttaataaaaaagtttggagaaactaataaagggaag
aaacgtgtgtgtcttattacaaatgcacaatgtccaataaaatatccttttgaaggaaca
aaagaagagcaagttaccgccattgctaagcaaatgaccatccatggtatgaaaatggaa
agtataattctcagaggaaagattagtcaagatggaaacaagagaacaatggatgagaat
gatcgtttattaaatatttttgctgaggaaacatcaacgagattgttgtatgtggagaat
ccaatttctttgtttggtgctattaaaacccggactataactccagttacagttttcaga
ggggatcttgaactcagcccaaaactgaggattaaggtaatggtatacaagaaaacagca
gaagagaaatttccaactctgaagagatattctgataaggctcctctaaatgataaatat
gccacacatgaagtcaaagttgaatatgaatacaagagttctgaagatcctgataaagtt
atccctccagatcaaagaattaaaggttatcgttatgggcctcaaatagttcctatatcc
tctactgagtgggaggctgttaagttcaaaacagaaaagggtgtaaagcttttgggattt
actgattcttcgaatgtattgagacaccagtacatgaaagatgtctatgttttcatagct
gaacctgaaaataccaaagccatacttgcagtttctgcactagcaagggctatgaaggaa
atgaataaggtggcgattttacggtgtgtatggaggcagggacaagcaaatgttgtcatt
ggggtcttgacacccaatttatctgacggagataatattcctgattcattttatttcaat
gtacttccttttgctgaggatgtacgagagtttcaattctcctctttcaccaattttcca
gcatcgtgtcagccaaatgaacaacagctagagtcagcagctaacttggtaaaaatgctt
gatcttgcaccacaagggaaagaggaagttttacgacctgactttactccgaatccagtc
ctggagcgcttttatcgttttctggaggtgaaatcaaagcatccagatgctgcggtacct
cctattgatgatacactgaagaaaattacagagcctgatgcagacctagttttgcaaaat
caatctgtgatagacgcattttgtaggtcttttgagctaaaggaaaatcccctgaagaaa
aggcgcttattgcaagaaaatatatcttcttcaatggatgaagagggtaaaggaaacatt
accgctcagcctgccaatcttattgaatctgttaaagtcgagaacattggggatgtgact
ccagtccaagattttgaagccatgatttcacgcagagatagtccagaatgggttgtgaaa
gcgatcaaggatatgaaaaataaaatatttgaccttgtagaggactccaatgatggtgat
aactatcccaaagcactggagtgtttagttgtgcttcgcaagggttgcattcttgagcag
gagccaaaacagttcaatgatttcctaaaacatctttgcaatttctgtcgagagaaaaac
cttgatggtttctgtgaatatcttgcttctaaagaactcaccttgatctccaaaacagaa
gctgcagacagtgaagttactgatgatgaagccagaagtttcttggttaaatctgaaaca
taa
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