Lotus japonicus: 130746784
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Entry
130746784 CDS
T04348
Name
(RefSeq) protein STABILIZED1
KO
K12855
pre-mRNA-processing factor 6
Organism
lja
Lotus japonicus
Pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130746784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130746784
Spliceosome [BR:
lja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
130746784
Complex C
U5 SnRNP specific factors
130746784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_16
ubiquitin
PMC2NT
IgD_del_linker
Motif
Other DBs
NCBI-GeneID:
130746784
NCBI-ProteinID:
XP_057455491
LinkDB
All DBs
Position
3:complement(85656422..85659800)
Genome browser
AA seq
1037 aa
AA seq
DB search
MVFIVPPHGRTLALNINPKTTTLHLLKLAIEQTHGIPVSQQRLLLSHSLRLLGVNDSLLI
SDLGVGPYSTLTLHVPLYGGMQPPVVPKPRFDFLNSKPPPNYVAGLGRGATGFTTRSDIG
PARAAPDLPDRSAAAASGAGRGRGKGGEDEEDEEGEDKGYDENQKFDEFEGNDVGLFASA
EYDEDDKEADAVWEEIDKRMDSRRKDRREARLKEEIEKYRASNPKITEQFADLKRKLYTL
SSDDWQSLEKFESGGYSSRSKKKRFESFVPVPDTLLEKARKEQEHVSALDPKSRVASGTE
TPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGMTNVDPKGYLTVLNSMKITSDAEIS
DFKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIEKGCEECPKNEDVWLEA
CRLANPEEAKAVIAQGVKSIPSSVKLWLQAAKLEHDDANRSRVLRKGLEHIPDSVRLWKA
VVELANEHDASLLLHRAVECCPLHVELWLALARLETYDNAKKVLNRARERLPKEPAIWIT
AAKLEEANGNTSMVGKIIERGIRALQREGVVIDREAWMKEAEAAERAGSVATCQSIIQNT
IGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTLSVFMQKKSIWLKAAQLEKSH
GTRESLDALLRTAVKYIPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLA
AFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIEEERRLLDEGLKQFPS
FFKLWLMLGQLEERLGENAKRLDQPEKRLDHLKEAKKVYESGLKNCPNCVPLWLSLATLE
EETNGLSKARAVLTMARKRNPQNPELWLAAVRAELKHASKKEADNLISKALQECPNSGIL
WAAAIEMVPRPQRKTKSMDALKKCDHDPHVIAAVAKLFWHDRKVDKARTWLNRAVTLAPD
IGDFWALYYKFELQHGAEENQKDVLKRCVAAEPKHGEKWQVISKAVENAHQPSESILKKV
VVALGKEENAADNNSKH
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcatcgtgcccccgcacggcagaaccctagccctcaacataaaccccaaaacc
accaccctccatctcctcaaactcgccatcgaacaaacccatggcatacccgtttcgcaa
cagcgcttgctcctctcacacagtctccgattgcttggagtaaacgattccctcctcatc
tctgacctcggtgtgggaccctactcaacgctcaccctccatgttcctttatacggcggt
atgcaacctccggtggttcctaagccgcggttcgatttcctcaactcgaagccgccgccg
aattacgtcgctggacttggtcgtggcgccaccggtttcactacccggtctgatatcgga
cctgcccgtgcagctcctgatcttcctgacagatctgcggccgctgccagtggcgccgga
agggggagagggaagggtggtgaggatgaggaggatgaggaaggggaagataaagggtat
gatgagaatcagaagtttgatgagtttgaagggaatgatgttgggttgtttgcttctgcg
gagtatgatgaggatgataaggaggctgatgcggtttgggaggagattgataagagaatg
gattcacggaggaaagatagaagagaggcgaggttgaaggaggagattgagaagtataga
gcttctaaccccaaaatcactgaacaatttgctgatttgaagcggaagctgtataccctt
tcttcagatgattggcagagtttagagaagtttgagagtggagggtattcctcaaggagt
aagaagaagaggtttgagagttttgtacctgtgcctgatactcttcttgagaaggcaagg
aaggagcaagagcatgtgtcagctttggatcccaagagcagggttgctagtgggactgag
actccctgggcacaaaccccagttactgatttgactgctgtgggagagggaagaggtact
gtgttgtccttgaagttggataggctgtctgattctgtttcagggatgactaatgtggat
ccgaaaggttatttgactgttctgaatagtatgaagataacaagtgatgctgagatttct
gatttcaagaaggcaaggttgttgcttaagagtgttactcagaccaatcctaaacatcct
cctggctggattgcggctgccaggttggaggagctggctggcaagcttcaagtggctagg
caattgatagagaagggatgtgaagagtgtcccaagaatgaagatgtatggttggaggct
tgtaggttggcgaatcctgaggaagccaaggctgtgattgctcagggtgttaagtcgatt
ccaagttctgtgaagttgtggctgcaggctgcaaaattagaacacgatgatgcgaacagg
agtagggtgttgaggaaaggcttggagcacatccctgattcagttaggctttggaaggcg
gtggtggagctcgcaaatgaacatgatgcgagtcttttacttcacagagctgtagaatgt
tgtccgttgcatgttgaattgtggctcgcacttgcaagattggaaacatacgacaatgct
aagaaggtcctaaatagggcaagggagaggctgcccaaggagccggccatatggataaca
gctgccaaattagaagaggctaatgggaatacttccatggttggtaagataatcgaaagg
ggtatcagggctttgcagagggaaggtgtggtgattgatagagaagcttggatgaaggaa
gccgaggcagcggaacgtgctgggtctgttgcaacttgccaatcaataatccaaaataca
attggaattggggttgaagaagaagataggaagaggacatgggttgccgatgcagaggag
tgcaagaaaagaggttccattgagactgctagagctatatatgctcatgccttgaccttg
tctgttttcatgcagaagaagagcatatggctcaaagcagcccaacttgaaaagagtcat
ggtaccagggaatcccttgatgctttacttcgtacagcagttaagtatataccacaggcg
gaagttctttggcttatgggtgctaaagagaagtggttggctggagatgtgcctgcagcc
cgtgctattctccaagaagcttatgctgccattcccaattctgaggaaatatggcttgct
gctttcaagctggaatttgaaaatcatgaacctgagagagctagaatgttgctggctaaa
gccagagagagaggaggtacagaaagagtgtggatgaaatcagcaattgttgagagagag
ctgggaaacattgaggaggagaggagattgttagatgaaggattgaagcaattcccttca
ttctttaaattgtggttgatgcttggccaactcgaggagcgacttggtgagaatgcaaag
aggcttgatcagcctgagaagcggcttgatcacttgaaggaagccaagaaggtgtatgaa
tctggactgaaaaactgtcctaattgtgtaccgctttggctctctcttgctactcttgaa
gaggagacgaatggactgagtaaagctcgagcagttctcaccatggctcgaaagagaaat
cctcaaaatcctgaactctggctggcagctgttagagcagagttgaagcatgcaagtaag
aaagaagctgataatttgatatcaaaagcattgcaggaatgtcccaatagtggtattttg
tgggcagctgctattgagatggttcctcgtccccagcgtaaaaccaagagtatggatgct
cttaagaaatgtgaccatgatccccatgttattgctgctgtggccaaattattttggcat
gataggaaagtggacaaagctcggacttggctgaatagggctgtaacactagctcctgat
attggggatttctgggcattgtactacaaatttgaactccaacatggagctgaggagaac
cagaaggatgtattgaagagatgtgttgctgctgaaccaaaacatggagagaagtggcaa
gtaatctcaaaggcagttgagaacgctcaccaaccgtcagaatccatcttgaagaaagtg
gtggttgcacttgggaaggaagagaatgcagctgataataatagtaaacattga
DBGET
integrated database retrieval system
