Lotus japonicus: 130747097
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Entry
130747097 CDS
T04348
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130747097
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
130747097
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_28
MMR_HSR1
AAA_15
AAA_16
RsgA_GTPase
AAA_33
AAA_18
AAA_22
AAA
AAA_30
Zeta_toxin
Spike_torovirin
Motif
Other DBs
NCBI-GeneID:
130747097
NCBI-ProteinID:
XP_057455914
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All DBs
Position
3:complement(22886313..22890596)
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AA seq
597 aa
AA seq
DB search
MVSDASKKKAAQKKAAAAAKRGGKAATAAASSKAAASDKAADKLANGIADMQISDRTCTG
VLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGHRE
LPIPEHMDIYHLTREIEASDMSALEAVVSCDEERLRLEKEAETLAAQDDGGGETLERIYE
RLEALDASTAEKRAAEILHGLGFDKKMQAKKTRDFSGGWRMRIALARALFINPTILLLDE
PTNHLDLEACVWLEESLKNFDRIMVVISHSQDFLNGVCTNIIHMQSKQLKMYTGNYDQYV
QTRSELEENQMKQYKWEQEQISNMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEK
VARDSVLVFRFVDVGKLPPPVLQFVEVSFGYTPDNLIYKNIDFGVDLDSRIALVGPNGAG
KSTLLKLMTGELGPTDGMVRRHNHLRIAQYHQHLAEKLDMEMSALLYMMREYPGVEEEKM
RAAIGKFGLSGKAQIMPMKNLSDGQRSRVIFAWLAYRQPQMLLLDEPTNHLDIETIDSLA
EALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVKKWEGGIMDFKRHLKAKAGLSD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgacgcgagcaagaagaaggcggcacagaagaaagcggccgcggcggctaag
agaggaggcaaggcggctaccgctgcggcttcgtcgaaagcggcggcgtctgacaaggct
gccgacaagctcgctaatggaattgcggatatgcagatttccgataggacctgtaccggc
gtcctctgttcgcatcctctctcgagggatattcggatagaatctctatcagttactttt
catggacatgatctgatagtcgattctgagttggagctgaattatggaagacgttatggg
ttgcttgggttaaatggttgtggaaaatctaccctgcttacagcaataggtcaccgagaa
cttcctataccagagcacatggatatttatcaccttaccagggagattgaagcctctgac
atgtctgcattggaagctgtcgtgagctgtgatgaggaaaggttgagattggagaaagaa
gctgaaactttggcagcacaggatgatgggggtggtgaaactctcgaacgtatttatgaa
cgattagaagccttggatgcatcaactgcagaaaagcgtgctgctgaaattttacacggt
cttgggttcgacaaaaagatgcaggcaaagaagactcgtgatttttctggtggctggaga
atgaggattgctttagcacgagctctatttatcaacccgaccattcttctacttgatgaa
ccaaccaatcaccttgatttggaagcttgtgtgtggctggaggagagtttgaagaatttt
gaccgtattatggttgtgatttcacattcccaggattttcttaatggtgtctgcacgaat
atcattcacatgcaaagcaaacaattgaagatgtatactggtaattatgatcaatatgtt
cagacacgatctgaactggaagagaaccagatgaagcagtacaagtgggagcaggaacag
atttccaacatgaaagaatacattgcccgatttgggcatggatcagcaaaattagctcgc
caagctcagagtaaggagaaaactcttgcaaaaatggagcggggtggacttacagagaag
gtagcaagagactcagttttggtattccgctttgttgacgtgggaaaacttccaccacct
gtgctccagtttgttgaagtgtcatttggttacactcctgataatctcatctacaagaac
attgactttggagttgatttagactccaggattgctcttgttggacccaatggagctggg
aagagtacattactgaaactaatgacaggtgaattgggtcctacagatggcatggttcga
cgccacaatcaccttcgcattgcacaatatcaccagcacttggctgaaaagctggacatg
gaaatgtctgctcttctgtatatgatgagagagtaccctggagttgaggaagagaagatg
agagcagctattgggaagtttggactgtcgggcaaagcgcagatcatgcctatgaagaac
ttatctgatgggcagaggagccgtgtgatatttgcatggttagcttatagacagcctcag
atgctacttttggatgaaccaactaatcatttggatattgaaacaattgactcactggct
gaagcattgaatgaatgggatggtggtctggtgcttgttagccatgattttaggctcata
aaccaggtagcccatgagatatgggtgtgtgaaaatcaagctgtgaaaaaatgggagggt
ggtattatggacttcaagcgacatctcaaggcaaaggctggtttatctgactaa
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