Lotus japonicus: 130747125
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Entry
130747125 CDS
T04348
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
lja
Lotus japonicus
Pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130747125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130747125
03041 Spliceosome [BR:
lja03041
]
130747125
03032 DNA replication proteins [BR:
lja03032
]
130747125
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
130747125
Spliceosome [BR:
lja03041
]
Complex A
U1 snRNP components
Sm proteins
130747125
U2 snRNP components
130747125
Complex B
U1 snRNP components
130747125
U4/U6.U5 tri-snRNP components
130747125
Complex C
U2 snRNP components
130747125
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
130747125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
130747125
NCBI-ProteinID:
XP_057455950
UniProt:
I3SGN2
LinkDB
All DBs
Position
3:complement(89157578..89159549)
Genome browser
AA seq
133 aa
AA seq
DB search
MSMSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTS
QLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDAKIKGKGASLGVGRGRAVAMRAKAQSAGR
GAAPGRGAPPVRR
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgagcaggagcttggggattccggtgaagcttctccacgaagcgtcgggtcac
gtggtcacggtggagctcaagagcggagaactctaccgaggcaacatgatcgagtgcgag
gacaattggaactgtcaactcgaaagcatcacctacactgcaaaggatggaaaaacatca
cagcttgagcatgtgtttattcgaggcagcaaagtcaggtttatggtcataccagacatg
ttgaagaatgctcctatgtttaagcgtcttgatgcaaaaatcaagggcaaaggtgcatct
cttggtgttggtaggggaagagcagttgcaatgcgagctaaggctcaatcggctggccgt
ggagctgcaccaggaaggggtgcaccaccagtgcggaggtga
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