Lotus japonicus: 130747269
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Entry
130747269 CDS
T04348
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
lja
Lotus japonicus
Pathway
lja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130747269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130747269
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130747269
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
130747269
NCBI-ProteinID:
XP_057456128
LinkDB
All DBs
Position
3:90755547..90756838
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AA seq
164 aa
AA seq
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MAGKAGATPATYSPSPTTDKKKTSLIKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYA
EFGNTKVIVSVFGPRESKKAMLYSDVGRLNCNVSYTTFATPVRGQGSDHKDYSAMLDKAL
GGAIILESFPKTTVDVFALVLESGGSKLKFSYLVSYVIHHDIVF
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaaagctggagccactccggcgacatactcgccgtctccgaccaccgataag
aagaaaacttctctcatcaaggaagattgggtccgacccgatggccgcggcttccaccag
tgcagacctgcctttttcaggactggtgctgtgaatgctgcatcaggatctgcttatgct
gagtttggaaacacaaaagtcattgtatctgtttttgggccgagagaaagcaagaaggcc
atgctgtacagtgatgtagggcgtctgaattgcaatgtcagctatacaacgtttgcaact
ccagttcgtggacagggttcagaccacaaagattactctgcgatgcttgataaagctttg
gggggtgcaataatattggaatctttccccaagacgactgtggatgtttttgcactggtg
ctggaatctggcggaagtaagcttaaattttcatatttggtttcatatgtaattcatcat
gatattgttttctag
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