Lotus japonicus: 130747533
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Entry
130747533 CDS
T04348
Name
(RefSeq) squalene synthase 2-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lja
Lotus japonicus
Pathway
lja00100
Steroid biosynthesis
lja00909
Sesquiterpenoid and triterpenoid biosynthesis
lja01100
Metabolic pathways
lja01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
130747533
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
130747533
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lja01006
]
130747533
Enzymes [BR:
lja01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
130747533
Prenyltransferases [BR:
lja01006
]
Terpene biosynthesis
Squalene/phytoene synthase
130747533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
130747533
NCBI-ProteinID:
XP_057456481
LinkDB
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Position
3:93106318..93112992
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AA seq
414 aa
AA seq
DB search
MGSLGAIVKHPDDLYPLLKLKMAARHAEKQIPSEPHWGFCYSMLHKVSRSFALVIQQLDT
DLRNAVCIFYLVLRALDTVEDDTSIATEVKVPILKAFHRHIYDRDWHFSCGTKEYKVLMD
QFHLVSTAFLELAKNYQEAIEDITDRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHASGKENLAADSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL
EDLKYEENSVKAVQCLNDMVTNALMHAEDCLKYMSDLRDDSIFRFCAIPQIMAIGTLAIC
YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFASMLESKVDKNDPNATKTLSRL
VAIQKTCRESGLLNKSRKSYILRKENGYGSTLIIILVLLFSIMFAYNSATRHSN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgggagcgattgtgaagcatccagatgatttgtacccgctgctgaagctc
aaaatggcggcgaggcacgccgagaagcagatcccttcggagccgcattggggcttctgc
tactccatgctccacaaggtttctagaagcttcgccctcgtcattcagcaactcgacact
gatcttcgcaacgccgtttgcatattctacttggttcttcgagctctggataccgttgag
gatgatacgagcatagctacagaagtaaaggtccccatactgaaagcttttcaccgtcac
atctatgatcgtgattggcacttctcatgtggcacaaaggagtacaaagttctcatggac
cagtttcatcttgtttcaactgcttttctggaacttgcaaagaactatcaggaagcaatt
gaagacattactgacagaatgggtgctggaatggccaaatttatttgcaaggaggtagaa
acaattgatgactacgacgaatattgtcactatgtggcaggacttgttgggctgggttta
tcaaagcttttccatgcctctggtaaagaaaatctggcagcggattccctttccaattca
atgggtttgtttcttcagaaaacaaacattattcgagattatctggaagacataaacgag
atccccaaatcacgcatgttttggccacggcagatctggagtaaatatgttaacaaactt
gaggacttgaaatatgaggagaactctgttaaggcagtgcaatgtctaaacgacatggtc
actaatgctctgatgcatgctgaagattgcttaaagtacatgtctgatttacgagacgat
tctatatttcgcttttgtgctattccccagataatggcaattggaacacttgcaatatgc
tacaacaacgttgaggtcttcagaggtgtagtgaaaatgaggcgaggtctaactgccaaa
gtgattgatcggacaaagaccattgctgatgtctatggtgctttctttgattttgcttct
atgttggagtccaaggttgacaaaaatgatcccaatgcaacaaaaacattgagcaggctg
gtagctatacagaaaacttgcagagaatctggactcctaaataaaagcaggaaatcttac
attctgaggaaagagaacggatatggctcaacactgattatcatactggtcctcttgttt
tccatcatgtttgcttataactctgctacccgccatagtaactag
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