Lotus japonicus: 130747646
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Entry
130747646 CDS
T04348
Name
(RefSeq) E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130747646
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130747646
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130747646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
Zn_ribbon_6
zf-RING_10
TRAF3_RING
zf-RING_4
zf-ANAPC11
Prok-RING_4
zf-Nse
RING_XB3-XBAT31
TerY_C
zf-CCCH_Mcm10
Sina_RING
zf-P11
zf-RING_6
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
130747646
NCBI-ProteinID:
XP_057456619
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All DBs
Position
3:94241103..94244834
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AA seq
235 aa
AA seq
DB search
MSSRAGKGPAVKSYRRKKCLIDLNLAPAVTENREQEGPSSQVVTQEVQGDQQPPVAQPPQ
DALPPEVAQPPEVAQQPQVAQPPLIDVEAIDDDDVIESSPRAFAEAKNNSRRNRARAVVD
LESDDQTRVTNNNRNKRRRETSNQTIINCDLFINLEGTSNSMRETVKKPPEPPKEPVFSC
PICMGPLVEEMSTRCGHIFCKACIKAAISAQNKCPTCRKKVTVKELIRVFLPSTN
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcgggctggcaaggggcctgctgtgaaaagctaccgacggaagaagtgttta
attgatctcaaccttgctcctgcggttactgagaatcgcgagcaggaaggaccttccagt
caggtggtgactcaagaagttcaaggtgatcagcaaccaccggttgcacaaccgccacag
gatgcactgccaccagaggttgcacagccaccagaggttgcacagcagccacaggttgcg
cagcctccactgattgatgttgaggccattgatgatgatgatgttattgaatctagccca
agggcttttgctgaggctaaaaacaattcaagaagaaatcgtgcaagggctgtagttgat
ttggagtcagatgatcagaccagggtgaccaacaataatcgcaacaaacgcagaagagaa
acctctaaccagacaatcattaattgcgatctcttcataaatttggaaggcactagcaat
tcaatgagggaaactgttaaaaagccacctgaacctccgaaggagcctgtctttagctgc
ccaatatgtatgggtcctttggtagaagaaatgtcaacaaggtgcggtcatattttttgc
aaggcttgcatcaaggctgctataagtgcccagaataaatgtcctacttgtagaaaaaag
gttactgtgaaagagcttataagagtgtttctcccatctactaactaa
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