Lotus japonicus: 130747649
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Entry
130747649 CDS
T04348
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lja
Lotus japonicus
Pathway
lja03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130747649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130747649
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
130747649
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130747649
Prokaryotic type
130747649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-GeneID:
130747649
NCBI-ProteinID:
XP_057456621
LinkDB
All DBs
Position
3:94251384..94257246
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AA seq
328 aa
AA seq
DB search
MLPHTLSRHIHPPLQLQTPEMASSKTLLDMFQPASKRMKPTLTTATTTTTTACKSDNAAN
GSSLSIDQKSRIEHNKLLAKSKRNLKICLERVSKFKASGGSGFVKLEELLVEESWLEALP
GELQKPYAVNLSKFVETEICGGDVYPPPHLIFNALNSTPFHHVKAVILGQDPYHGPGQAM
GLSFSVPEGVKVPSSLVNIFKELHKDVGCSVPSHGNLEKWAVQGVLLLNAVLTVKKHQAN
SHAKKGWEHFTDAVIKTISQKNEGVVFLLWGNSARAKSRLIDATKHHILEAAHPSGLSAN
RGFFGCRHFSRTNQLLEKMGTGPIDWQL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctaccacacactctttcccgccacatacacccaccattgcaattgcaaacgccagaa
atggcttcttccaaaaccctactcgacatgttccaacccgcttccaagcgcatgaaaccc
accctcaccaccgccaccaccaccaccaccaccgcatgcaaatccgacaacgccgctaat
ggctcctcactttccattgaccaaaaatcgcgcatcgaacacaacaaactcctcgccaaa
tccaagcggaacctcaaaatctgcctcgaaagagtctccaaattcaaagcctcaggtggt
agcggttttgtgaaattggaggagttgctggtggaggaatcgtggttggaagctcttccc
ggcgaactccagaaaccctacgctgtcaatctttccaaattcgttgaaacggagatttgc
ggtggcgatgtgtaccctccgccgcacttgatcttcaacgcccttaactccacccctttt
catcatgtcaaggctgtgattctcggccaggacccttatcatggacctggtcaagcaatg
ggtctttcattctcagtccctgagggagtcaaagttccttccagtttggtgaatatattc
aaggagcttcacaaagacgttggctgctccgttccgtctcatggtaatctggaaaaatgg
gctgtgcagggtgttctcttactcaatgctgttctcacagtcaagaagcatcaagcaaat
tctcatgcgaaaaaaggctgggaacattttacggatgctgttatcaagacaatctcacag
aagaatgaaggggttgtgtttctgttgtggggaaactctgctcgcgcgaaatctaggtta
atcgatgcaacaaagcatcacattctagaagctgcacatccttctggtttgtctgcaaat
aggggcttctttggctgcaggcacttctcccgcactaaccaacttctggagaaaatgggg
actggtcctatagattggcaactataa
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