Lotus japonicus: 130747787
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Entry
130747787 CDS
T04348
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
lja
Lotus japonicus
Pathway
lja00450
Selenocompound metabolism
lja00970
Aminoacyl-tRNA biosynthesis
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
130747787
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130747787
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lja01007
]
130747787
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lja03016
]
130747787
Enzymes [BR:
lja01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
130747787
Amino acid related enzymes [BR:
lja01007
]
Aminoacyl-tRNA synthetase
Class I (U)
130747787
Transfer RNA biogenesis [BR:
lja03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
130747787
Prokaryotic type
Other AARSs
130747787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
130747787
NCBI-ProteinID:
XP_057456803
LinkDB
All DBs
Position
3:complement(95500313..95520498)
Genome browser
AA seq
802 aa
AA seq
DB search
MAEDRKTPKLPVEGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYI
CGTDEYGTATETKAMEENCSPKEICDKYHAIHSEVYNWFNISFDEFGRTSSPQQTEVCQA
IFKKVFDNKWLSENTMQQLYCDTCQRFLADRLVEGNCPTPGCGYDSARGDQCEKCGKLLN
PTELKDPRCKVCRNSPRIRDTDHLFLELPLLKDKLEKYIKEMSVAGSWSQNAIQTTNSWL
REGLKPRCITRDLKWGVPVPHEKYSDKVFYVWFDAPIGYVSITACYTNDWEKWWKNPENV
ELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKGIGVFGND
AKDTNIPVEVWRYYLLTNRPEVSDTLFTWTDLQAKLNGELLSNLGNFVNRVLSFIAKPAG
QGYDSTIPAVPNDVSGDSHNPTKKMADKVIAYVEQYIEAMEKVKLKQGLKIAMSISGEGN
AYLQETEFWRLYKGNPSLCSLVMKTAAGLVYLLACLLEPFIPSFTVEVFKQLNLSTDMHL
SLCDDKGDIDRVRRPWDLISVGHKIGTPKPLFRELKDEEVELYRNKFAGSQADRIIRAEA
ENVAEQLRNTNVSDGNGKKKSSAKSSNVTKNKAAAEQEITISRLDIRVGLIKKAEKHPDA
DSLYVEEIDVGEEQTRTVVSGLVKYIPIDEMQNRKVCVLCNLKPAAMRGIKSHAMVLAAS
NDDHTKVELVESPSSAVVGERVTFPGFEGNPDELLNPKKKVWETLQVDLHSNEELVACYK
NIPLTTSAGVCKVSSIRNGSIR
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagatcggaaaacaccgaagcttcccgtcgaaggcaagcgcaacatcctcatc
accagcgccttgccttacgtcaacaacgtccctcatctcggcaacatcattggatgtgtg
ttgagtgctgatgtgtttgctcgctactgtcgccttcggggttacaatgctatttacatc
tgtggcactgatgagtatggaactgccactgagactaaagccatggaagagaattgctcc
cccaaagagatttgtgacaagtatcatgctattcacagtgaggtctacaattggttcaat
ataagtttcgatgaatttgggcggacctcatcccctcagcaaactgaagtttgccaagcg
atttttaagaaagtatttgacaacaaatggctctccgagaacaccatgcagcagctttac
tgtgatacatgccaaaggttcttggctgatcggctcgtggagggtaactgtccaactccg
gggtgtgggtatgattctgctcgaggagaccaatgtgagaagtgtggaaagcttctgaat
ccaacagaattgaaggatcctaggtgcaaggtttgtcgaaattctccccgtattcgtgat
acggaccacttgtttcttgaactccctctgttgaaagataaattggaaaaatacatcaaa
gagatgtctgtagccggatcatggagtcagaatgctattcaaacaacaaattcatggctt
agagagggattaaagccacgttgtattaccagggatctgaaatggggggttcctgttcca
catgaaaaatacagtgacaaggttttctatgtttggtttgatgcacctatcggatatgtc
tcaatcaccgcatgctacacaaatgattgggagaaatggtggaaaaacccggagaatgtg
gagttgtatcagtttatgggcaaggacaatgtaccattccacactgtgatgtttccatct
acactacttggaactggtgagaattggactttaatgaagaccatcagtgttaccgaatac
ttgaattatgaagcagggaagttttctaaaagcaaaggcattggggtatttggtaatgat
gcaaaagatactaatatcccagttgaagtatggagatattacttgctcacaaataggcct
gaggtatcagatacattattcacgtggactgacttgcaagcgaaattaaatggggagttg
ctgagcaatttgggcaactttgtcaatcgagttttgagttttattgccaaacctgcaggt
caaggatatgattccactattcctgctgttcctaatgatgtaagtggtgactcccacaat
ccgacaaaaaaaatggctgataaagttattgcatatgtggagcaatacatagaagcaatg
gagaaggttaagctaaagcaaggattgaaaattgcaatgagcatatctggcgaggggaat
gcatatctgcaggaaactgaattctggcgcctttacaagggaaacccttctctctgctcc
cttgttatgaaaactgcagctgggcttgtatatcttcttgcttgtttattagaacctttt
ataccatcattcactgttgaggtatttaagcagttaaatttgtccacggatatgcatctt
tcactttgtgacgataaaggagatattgatagggtaagaagaccctgggatctcataagt
gttggtcataaaattggaacacccaagccattgttcagggagctgaaagatgaagaagtg
gagctctacagaaataagtttgcaggaagtcaagctgatagaattatccgtgcagaagct
gaaaatgttgctgagcaactaaggaacacaaatgtttcagatggcaatggaaagaaaaaa
tcatcagcaaaatcatcaaatgtaacaaaaaacaaggctgctgctgagcaagaaattacc
atctcaagacttgatatccgggttggtctcataaagaaagctgaaaaacatcctgatgca
gattctctatatgttgaagagatcgatgttggtgaagaacagaccagaactgttgtcagt
ggactggtcaagtatataccaattgatgaaatgcagaaccgaaaggtttgtgttctttgc
aacctaaagccagcagccatgaggggcattaaatctcatgctatggttcttgctgcttcc
aacgatgaccacaccaaggttgagttggttgaatctcctagttctgctgttgttggagaa
agagtcacattccctgggtttgaaggtaatcctgatgaactcttgaacccaaagaagaaa
gtttgggagacactgcaggtggatctgcacagtaatgaggaactagtggcctgctacaaa
aatattccacttaccacatcggctggtgtttgcaaggtttcatccatacgcaatggatca
attaggtag
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