Lotus japonicus: 130747847
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Entry
130747847 CDS
T04348
Name
(RefSeq) DNA topoisomerase 1 alpha-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
130747847
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
130747847
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Topoisomerases
130747847
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
MscS_porin
Trimer_CC
CATRA-C
Motif
Other DBs
NCBI-GeneID:
130747847
NCBI-ProteinID:
XP_057456880
LinkDB
All DBs
Position
3:complement(96027802..96035752)
Genome browser
AA seq
896 aa
AA seq
DB search
MAVEASDKPNLPDNFDDEPLVFKRYKSKKSQLNSEVRKSTSQSHDGPSYRQNSDGPSSNG
KTSSMQKGNIVPSAKVTPPVKASVGISKASNSLGNASSAKLPLANSKLVSSRDKPKTLSE
QKMSINVKEEKNIKNCSKDEDSEDDDDHKPLSARLKVNSHHDNKTSPVVVKKSSEDSEDD
DDDIPLSVKINRNSNLATSSSNYDDSDKKPISKVQKERQNGSGITIKQERASTLPVKRPI
DNSNSLNSSMKKPKVSDSAASTKAKQVSGKSQPKIEDDDDDDVPISQRIKNSAKSAAKSV
SIKKTVTKATKVNKSGTTSFKKQAKFKSKKSGSGSEYSKASKLLPSSGDGQKKWTTLVHN
GVIFPPPYQPHRVKMLYKGKPVDLTADQEEVATMYAVMRDTDYMLKDKFKENFWNDWRKL
LGKNHVIQNLKDCDFTPIYDWCQTEKEKKKQMTTEEKKALKEEKTKQEEKYTWAIVDGVK
EKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDIVINIGKDAPIPECPIPGERWKEIRH
DNTVTWLAFWNDPINPKLFKYVFLAASSSLKGQSDKEKYEKARMLKDYIGNIRAAYTKDF
TSKDITKQQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTREAPNKLKFNFLG
KDSIKYENTVEVELPVYNAILKFQKDKKGGDDLFDMLDTSKLNAHLKELMPGLTAKVFRT
FNASITLDDMLNKDTKDGDVGEKIVVYQHANKQVAIICNHQRSVSKSHDTQMTRLNEKLD
ELQAVLKELRTDLDRARKGKPPSKSPDGKKKKNLSSEALEKKISQTNAKIEKMQRDMKTK
EDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPDFRF
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggaggcttctgacaaaccaaatctgccagataattttgacgatgaaccatta
gttttcaaaaggtataagagcaagaaaagtcaattgaattcagaagtaaggaagtcaact
tctcaaagccatgatggaccgtcatatagacagaattctgatgggccttcttcaaatgga
aaaacttctagcatgcagaaaggtaatattgtcccgtctgctaaggtaacaccacccgtg
aaggcttctgtaggtatctcaaaagcatctaattcacttggcaacgcctcatctgctaag
ttgcctctggcaaattcaaagttagtttcatcgagggataaacctaagactctttcagaa
cagaaaatgtccattaatgttaaggaggaaaaaaatatcaaaaattgttctaaagatgaa
gattcagaggacgatgatgatcataaaccattgagtgctaggttgaaggtgaactctcac
cacgacaacaaaacgtcccctgttgttgtcaagaagtcttctgaagactctgaagatgat
gatgatgatatccctttgtcagtaaagataaaccgtaattctaatttggcaacatccagc
agtaactatgatgattctgataagaagcctatttcaaaagttcagaaagagcgtcaaaat
ggttctggcataactattaaacaggaaagggcatctacactaccagttaagagacctatt
gataacagtaactccttgaactcttcgatgaagaagccaaaggtttcagattcagctgca
tcaaccaaagctaagcaagtctctggaaaaagccagccgaagatagaagatgacgatgat
gatgatgttcctatttcccagagaataaagaattcggccaaatcagctgctaaatcagtt
tccataaagaagacagtgacaaaggctactaaagttaataagtctggcacaacatctttt
aagaaacaggccaagttcaagtcaaaaaaatcaggcagtggttcagaatattccaaagct
tcaaaacttcttcctagctctggtgatgggcagaaaaaatggacaacattggttcacaat
ggtgtcattttccctcctccttaccagccccatagggtaaagatgctctataaggggaaa
ccagttgacttgactgctgaccaagaggaggttgctacaatgtatgcggtcatgcgagat
acagattacatgctgaaagataagttcaaggaaaatttctggaacgactggcgaaagttg
ctaggaaaaaatcatgtaattcagaacttaaaggattgtgactttaccccgatctatgac
tggtgccaaactgaaaaggaaaagaagaaacaaatgactacagaagagaagaaggctctg
aaggaagagaaaacaaagcaagaggagaaatacacgtgggctattgtggatggtgttaaa
gagaaggttggaaattttagagttgaaccaccaggattgttccgaggccgtggagagcat
cccaagatgggaaaattgaaaagacgcattcgtcctagtgatatcgtaattaatattgga
aaggatgcaccaattcctgaatgtcctattcctggtgaaaggtggaaggagataagacat
gacaatacagttacatggttagccttctggaatgatccgatcaatccaaagttgttcaag
tatgtgtttctggcagctagtagttccttgaagggccaaagtgacaaggaaaagtatgag
aaagctaggatgttgaaggattatatagggaacattagagcggcatacacgaaagatttt
acaagtaaagatattacgaagcagcaaatagctgttgctacttatcttattgataaacta
gctctgagggctggcaatgagaaggatgatgatgaagctgatactgttggttgctgcaca
ttaaaagtggagaatgtgacaagagaagcccccaacaagttgaagtttaacttccttggt
aaagattcaatcaagtatgaaaatacagttgaggtcgagcttcctgtttacaatgcaata
ttgaagttccaaaaagataaaaagggtggtgatgatctttttgacatgttggatacaagt
aaattaaatgcacatctgaaggaactcatgcctggtctaacagcaaaagtcttccgtaca
ttcaatgcatctatcacattggatgatatgttgaataaggacactaaagatggagatgtt
ggggaaaagattgttgtttatcagcatgcaaataaacaggttgcaatcatttgtaatcat
caacgtagcgtttcaaaatctcacgatacacaaatgacaaggttaaatgaaaagcttgat
gaacttcaggctgttctgaaggagctaagaacggatttggacagggctaggaaaggaaag
cccccttcaaagagtccagatggaaagaagaagaagaacttgtcttccgaagcgctagag
aaaaagatatctcaaaccaatgcaaagattgagaaaatgcagcgtgatatgaagacaaaa
gaagatctcaaaactgtggcattaggcacatccaagataaactaccttgatcccaggatt
acagtcgcctggtgcaagagacacgaggttcctattgaaaagattttcaacaagtctctg
ctggcaaagttcacttgggctatggatgtggaccctgacttcagattctga
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