Lotus japonicus: 130747953
Help
Entry
130747953 CDS
T04348
Name
(RefSeq) autophagy-related protein 3 isoform X1
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
lja
Lotus japonicus
Pathway
lja04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130747953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130747953
04121 Ubiquitin system [BR:
lja04121
]
130747953
03029 Mitochondrial biogenesis [BR:
lja03029
]
130747953
Membrane trafficking [BR:
lja04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
130747953
Ubiquitin system [BR:
lja04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
130747953
Mitochondrial biogenesis [BR:
lja03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130747953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
130747953
NCBI-ProteinID:
XP_057456999
LinkDB
All DBs
Position
3:complement(97036473..97040646)
Genome browser
AA seq
314 aa
AA seq
DB search
MVLTQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVAKCPTWSWESGEPS
KRKSYLPSDKQFLITRNVPCLRRAACIEAEYEAAGGEVLLDDEEHDGWLATHGKPKEGKS
DEGDNLPSMESLEISKKSPIKQIHSYMGGDEDDDIPDMAEFEETDNVIETDAATLQSTYL
VAHEPDDDNILLTRTYDISITYDKYYQTPRVWLTGYDESRMLLQPELALDDVSQDHAHKT
VTIEDHPHLPGKHASIHPCQHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIE
YDYTMDFDLGSSSN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgactcagaagcttcacgaagctttcaaaggcaccgtcgagagaatcacaggt
ccccgcaccgtctccgccttcaaagagaaaggagttctcagtgtctccgagttcgtcatc
gccggcgataatctcgtcgccaagtgccccacctggtcatgggaatcgggtgaaccgagc
aagaggaagtcatatttaccatctgacaaacaattcttaatcacaagaaacgtgccttgt
ctacggagagctgcatgtattgaagcagaatatgaagctgctggaggggaagttctactt
gatgatgaagagcatgatgggtggctagcaacccatgggaaacccaaagaaggaaaatct
gatgagggtgacaatttaccttctatggaaagcctagaaatcagcaaaaagagtcccatt
aagcaaattcattcctacatgggaggtgacgaagatgatgatattccagatatggcagag
tttgaagaaactgacaacgttattgagacagatgctgccactcttcagtccacatatcta
gttgctcatgaacctgatgatgacaatatcctactaacccgcacatatgacatcagcatc
acgtatgataaatattatcaaacacctcgggtgtggcttactggatatgatgagtcaaga
atgctgttgcaaccagaacttgcccttgacgatgttagtcaagatcatgcacacaaaacg
gtaacaattgaagaccaccctcacttgcctgggaagcatgcatctattcatccatgtcaa
cacggagcagtgatgaagaaaatcattgatgtgttgatgtcacgtggtgttgagcctgaa
gttgacaagtacctatttttattcttgaagtttatggcctctgtaattccaacaattgag
tatgattacactatggactttgaccttggtagctccagcaattga
DBGET
integrated database retrieval system
