Lotus japonicus: 130748333
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Entry
130748333 CDS
T04348
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
lja
Lotus japonicus
Pathway
lja00730
Thiamine metabolism
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
130748333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130748333
Enzymes [BR:
lja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
130748333
Ribosome biogenesis [BR:
lja03009
]
Prokaryotic type
GTPases
130748333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
AAA_29
ABC_tran
AAA_23
nSTAND1
AAA_21
AAA_16
eIF-1a
SMC_N
AAA_22
AAA_24
AAA_15
AAA_28
Guanylate_kin
Il2rg
IIGP
Septin
Roc
Motif
Other DBs
NCBI-GeneID:
130748333
NCBI-ProteinID:
XP_057457501
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All DBs
Position
3:17110840..17114520
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AA seq
463 aa
AA seq
DB search
MSLTSLSAIRHRTVASTTATLLIRRFRSLPISAAARQPKQDAPSKNLLKAKKHSLKEFST
LGPVLSHDNTPPLSESQAVGVVAASQANFMRVVLPSGGVELLCVVRALLKKIKRRVMVGD
KVLVGSIDWVDRRGMIENVFQRNSEILDPPVANVDHLLVLFSLQNPKPEPFTLTRFLVEA
ESTGIPLTLALNKIELVDNETVASWKARVRDWGYDPILCSVESGHNLDLLAFKLRDQTTV
IVGPSGVGKSSLINALRTNPRVCETAEGENWFEPILGSKWFEDQRVAEVSTRSGRGKHTT
RHVSLLPLSGGGYLADTPGFNQPSLMKVTKQSLAETFPEIRKMLSANESAKCSFNNCLHL
GEPGCIVKGDWERYSFYFQLLDEIRIREEFQLRTFGTKRESDVRLKMGDMGVQQAEPRLE
PKKHRRQSRKRINQSFLDEVDDDDDLIDEENDPVLRALRNENP
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacatcactctccgccatccgccaccgcacggtggcgtccaccaccgccact
ctcctcatccgccgcttccgctccctccccatctccgccgcagcccgacaacccaaacaa
gacgccccaagcaaaaacctcctcaaagcaaaaaaacactccctgaaagaattctccact
ctcggccccgtcctctcacacgacaacacccctcccctctccgaatcccaggccgtcggc
gtcgtcgccgcctctcaggccaacttcatgcgcgtcgtgctcccttccggcggagttgag
cttctctgcgtggtgagggcgcttctgaagaagatcaagcgtagagtcatggttggtgac
aaggtgcttgttggttccatcgattgggtggatcgtaggggcatgattgagaacgttttt
cagcggaattcggagattcttgaccctcctgttgctaatgttgaccatttgcttgtgctt
ttctcgcttcagaaccctaagcctgagccatttacgctcacaaggtttttggttgaagct
gagtctactgggattcctcttactcttgcactcaacaagattgagcttgtggataatgag
accgtggcttcctggaaggctagggtacgggattggggctacgatccaattttgtgcagt
gttgaatctggacataaccttgatcttcttgcgttcaaattgagagatcaaacaacagtg
attgtgggtcctagtggagttgggaagtctagcttgatcaatgcccttagaacaaatccc
cgagtttgtgaaactgcagaaggggaaaattggtttgaacctattctaggtagcaagtgg
tttgaggatcagcgagttgcggaagtttcaacaagaagcggcagagggaagcatactact
cgccatgtcagtctgcttccattatctggagggggatatcttgctgatactcctggattt
aaccagcctagcttgatgaaagtgacaaagcaatctcttgcagaaacttttcctgaaatc
aggaaaatgcttagtgccaatgagtctgcaaaatgctcctttaacaattgcttgcatctg
ggtgaacctggctgcattgtgaagggggattgggaaagatattcattctattttcaactt
ctggatgaaattagaatcagggaggagtttcagttgaggacatttggaactaaaagagaa
agtgatgtaaggttgaaaatgggagatatgggtgttcagcaagcagaacctaggttggaa
cctaagaagcataggagacaatctcggaagaggatcaaccagtcatttttagatgaagtg
gatgatgacgacgatttgattgacgaggagaatgatcccgttttaagggcattgaggaat
gaaaacccttaa
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