Lotus japonicus: 130748425
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Entry
130748425 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130748425
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130748425
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lja01002
]
130748425
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130748425
03036 Chromosome and associated proteins [BR:
lja03036
]
130748425
03400 DNA repair and recombination proteins [BR:
lja03400
]
130748425
Peptidases and inhibitors [BR:
lja01002
]
Metallo peptidases
Family M67
130748425
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130748425
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
130748425
BRISC complex
130748425
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
130748425
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
130748425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
130748425
NCBI-ProteinID:
XP_057457632
LinkDB
All DBs
Position
3:1273760..1279719
Genome browser
AA seq
432 aa
AA seq
DB search
MSLTSVKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR
KDRVETNPEQLAAASALADRMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLD
SGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRSAVIDIDSSPSSS
ENVSRRSGYFKAESPDQDTGDSRSAGASKGGGRSSDLGNFFANADASYLGGEKGGGNYLL
NNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSLSLINLDSPLASY
MDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLIEYCLSPAITALQ
DRLRENEVRLAIMSEEAKSLEAEAYRGSEASLSSPRRVASPVHQVASPVHRGSLSPASRN
VASPGSRSRRGY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacaagtgtgaaaatgtcggaagaagtttggttaacctgcgtcactcatgca
ttgtccaccgaaaccgaagagattatgggtcttcttctcggtgacatccagcattcgaaa
aatgggagtgtgactgcattgatatggggtgcatctcctcagacaaggtctgatcgcaga
aaggatcgagttgaaactaaccctgaacagttggctgctgcttctgccctagctgataga
atgaccgcgaccacgggaagaacaacgagggtcattggttggtaccattcccatccgcat
attacagttctgccttcgcatgttgatgtgcggactcagggaatgtatcaacttcttgat
tctgggtttatcgggttgattttttcctgttacagtgaagatgcaaacaaggtcggaaga
attcaagtaattgctttccagtcatctgatgggaagcagaatcacatgtcaagacctata
cctctgtcccctgtaaatagaagcgctgttattgacatagattcgtcaccgagttcctca
gagaatgtatcgagaagatctggttacttcaaggcagagagcccggatcaggacactggt
gattcaagaagtgctggtgctagtaaaggtggagggagatcttcagacttggggaatttc
ttcgctaatgctgatgccagctatctagggggagaaaagggtggaggaaactaccttctc
aacaattcggacagcaaagaaattgatattgatcccatggatatgtcagaaagtatgcag
gaagctatgcatcgttcaaatttggacatgagtggtgcagagtatgtaagaagagaaatt
cccctttatgttttaccttccttatctcttatcaaccttgattcaccactagcatcatat
atggatctgcaacatgtaatatttgaagaggagcggactgcatataatcaagccatatcg
caaaatatgagggatgagaaagtgcatccactcactttcatacaccatacttcaacttat
caggcttcattatgcaagttgattgaatattgtttaagtcctgcaattactgcacttcaa
gatcgactgagagagaatgaagttcggttagcaattatgagtgaagaagccaagagtcta
gaggctgaagcttatagagggagtgaagcaagtttaagttctccccgtcgagttgcatca
cctgtacatcaagttgcatctcctgttcatcggggaagtttgtctcctgcttcgaggaat
gtagctagtcctggtagccgaagcagaagagggtattaa
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