Lotus japonicus: 130748584
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Entry
130748584 CDS
T04348
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130748584
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130748584
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
130748584
NCBI-ProteinID:
XP_057457799
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Position
1:complement(73596232..73605495)
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AA seq
399 aa
AA seq
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MEGLFSVIFMLFVAATPSLYARVTPNAGSSNFNIVNYGAKGDGQTDDSQAFVKAWNDMCA
ATQGAPTLLIPKGKSFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWI
NFSGINGLVIRGGGTFDGQGGPWWAKYSDDSDRPSALRFNSCKNLALSATNHINSPRNHI
SISSCSGSSISNIHVTAPEESPNTDGIDISGSTNILIKDSTIRTGDDCIAINDGSSFINI
TGITCGPGHGISVGSLGRDRKFETVEEVHVRNCIFQGTTNGARIKTWQGGSGYARKITFE
DIILDEAENPIIINQNYRAYQRNGLADAVKVSEVTFRNFTGTSASEEAITLNCDPTVGCT
GIILNKINIKYVSAGKRTRALCNNVRGSFSLCSPNVVCS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcctattttctgtgatttttatgttgtttgttgctgctacacctagcttgtat
gctagagtaacacccaatgcaggatctagcaacttcaatattgttaactatggtgcaaaa
ggggatggccaaactgatgattcacaagcttttgtgaaagcatggaatgatatgtgtgct
gcaactcaaggtgccccaacacttctcatacccaaagggaaatcattcatgttgcaacct
gtgtcatttaaaggtccctgcaaatctaacaatgttaacattgagcttcagggcactctt
gttgcccctaaaagtgttgttgcttggaaatgggcaaataataataagggagcatggatc
aatttctcaggaataaatggccttgttattaggggaggaggaacattcgatgggcaaggt
ggtccatggtgggccaagtactctgatgattctgacaggccaagtgcacttcggtttaat
agctgtaagaatctagcccttagtgcaacaaatcacatcaacagcccaagaaatcacata
agtataagttcatgcagtggctctagcatttccaatattcatgttactgccccagaggaa
agtcctaacaccgatgggattgatatctcaggatcaactaacatcctcattaaggattct
acaattcgaactggagacgattgcattgccatcaatgatggttcctcttttatcaacata
actggtattacatgtggtcctggccatggcatcagtgttgggagccttgggagagataga
aagtttgaaacagtagaagaggtacatgtgagaaattgcatcttccaaggaaccacaaat
ggtgccagaatcaagacatggcagggaggatccgggtatgcgaggaagataacttttgaa
gatattatacttgatgaagcagagaaccctatcatcattaaccaaaattatagggcttat
caacgtaatggtcttgcggatgcagtgaaagtgagtgaagttactttccgtaacttcaca
ggaacctcagcttctgaggaggcaatcacactgaattgtgaccctaccgtcggctgcacc
ggcattatattaaataagattaacataaaatatgtatcagcagggaaaagaacacgtgcg
ttgtgtaataacgttcgtgggtcattctctttatgtagtccaaatgttgtctgttcttga
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