Lotus japonicus: 130748732
Help
Entry
130748732 CDS
T04348
Name
(RefSeq) nuclear-pore anchor-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130748732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130748732
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130748732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
130748732
NCBI-ProteinID:
XP_057457959
LinkDB
All DBs
Position
3:complement(16422850..16455515)
Genome browser
AA seq
2071 aa
AA seq
DB search
MPLFISDEEFSRCSGDTTAVAAKADSYIRSLLLELDTVRAKADASDINAEQNCSLIEQKY
LSLAAEFSKLESHVSDLQSSLDQRQRELSDVQSQNHQFQLQLVEKDREIERLKTEVNELH
KAKRQLIELNEQKDSEHSEKSATIKSYLDKFIRLSENAALKEARLTEAEAELVRSRAACA
RLEQEKEIVERQNAWLNEELTAKVNSFNELRKRHTELDTDLTSKLADVERQFSECSKSLE
WNKGRVKELEIKLKSMQEELITAKDAAAANEERFSAEISTVNKLNELYKESSEEWSRKAA
DLEGGVKAMESYLKQVEDDYKEKLEKESSARKQVEKEAADLKEKLEKFEAEIEASKKSNE
LINLPLSSFSTEPLLTSIVADGMVEENNMLVPKIPFGVSGTALAASLLRDGWSLAKMYAK
YQEAVDAFRHEQLGRKESEAILQRVLYELEEKAEAIIDERVEHEKMVDTYSLMSQKLQNS
LNDNSNLEKTIQELKADLKRHEREYNLAQKENDDLRKQVTVLLKECRDIQLRSGSNGNDV
VDVASNIALRTSRGTEPEDVISDHILTFKDINGLVEQNVQLRSLVRSLSGQIENQEVEYK
EKLEMELKKHTEEAGSKVAAVLQRAEEQGNMIESLHASVAMYKRLYEEEHSLHLSHAHSS
EALAAVSEVRRNNLKTSIESSQEIAKKSLEKAAERVRSLEDDLAKSRSEIIVLRTERDKI
LLEANFARERLDSSMKEIEHQKAEAKGILARNVEFSQLIVDYQRKLRESSDSLNAAEELT
RKLSMELSILKHEKEVISNAEKRASDEVRSLSERVQSLQASLSTIQSAEEVREEARAAEK
VKQEEYIKKLEREWAEAKKELQDERENVQRLTLDREQAMKNYMRQVEDTHKELANALSAV
ASAESRASVAEVKLSSLQRKMGPSNEKLVEVDGVSGPSTLSSDEVVAELQTAKEEIEKLK
EEAQANKAHMLQYKSIAEVNEDAMKQIEIAHDNYKIEVDNAKKALELEVHALREKVSELE
NESSLKFEEVASATAGKEEALTSALAEISNLKEEILNRCSQISAMELQISDLKEQLDKEH
QKWRAAQTNYERQVILQSETIQELTKTSEALALLQEEASKLRTLADAQKIENRELKAKWE
EEKAGLERSKNDAEKKYDEINEQNKILHSQLEALHIQWAEKERNAAGISSGSSSADTFSD
AGLQNVISYLRRSKEIAVTEVSLLKQEKLRLQSQLESALKASESAHASLEAERAKSRSFL
FSEEEFKSLQLQLREINLLRESNVQLREENKYNFEECQKLREVAQKARVETENLENLLRE
REILLESHNKEIETLKLEKDNLNYKVTELLERCKNVDVEDYDRVKKLVRDLQDKLRDRDA
QIEETAKVLSEKQDSVSRLEQDLSNCRSELMEREKRINDILHTEANLKQDTEKHRKLLAQ
FKKKIDALSREKEDLVKENQQLSKQLDEIKGKRLTSDTTAEQAMKEEMDTRIQTLEKTVA
RLRDEVKKEREDKNMERNRRLKTEKAIKDSYNNVEQEKKQFINELERHKEALKRLSDEVE
KLKIVVGNLPEGSDVAQLLSGPNVDDFSAIYMSAVENFEKVAQSVISEFGGRGNLGDATA
TTDGSAAATGSVVHAQSQSIIPLAASGTSNLPPKATGESEKRLALPKSVVETRKAGRRLV
RPRLVKQDEPQGDVEMSETEGLGGKPGPSSDTETQSNLALSSQPLARKRVAPTSTSELLE
ESVAPGDKSSEPLVKKSRGVESQEETGEEPPAATSEFSGSHPATEESFESGELPQGQNEE
LGDAQNDDGETAVSKDEESKDPQQFDGTTSQEELQGDKTGISEENPDQSAEAKILSDEMQ
MDHPEPDNQQPGSDREEGEMLPETGDSEGEPQESREGPSDPVASPEPSPARVDDEGLEAG
EINSPDLSSEDKNDEGDLVEEAADGSDKLIDVNETTSVESDPVAEPAPVASESTLTSGAA
ESSSSKSNLPVPKQGTTGTPSETGESRQASPINPSTTINLQERARQRAQLRQAGQERATS
ATPRGRGRPNIRGGRIVRGRGGRRPPPHADA
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgccgctatttatctccgacgaggagttttcgcggtgctccggcgacaccaccgccgtc
gccgccaaggcggactcctacatccgcagcctcctcctcgaactcgacaccgtccgcgcc
aaagctgacgcctccgacatcaacgccgagcagaactgctctctcatcgagcagaagtat
ctctctctcgccgccgaattctccaagctcgagtcgcatgtttccgacctccaatcgtct
ctcgatcagcgccaacgagaactctccgatgtgcagtcgcagaatcaccaatttcagctg
caactggttgagaaggatagggagattgagaggttgaagacggaggtgaacgagctgcat
aaggcgaagagacagttgattgaattgaacgagcagaaggattcggagcatagcgagaag
agcgctaccatcaagagctatcttgataaatttattcgtttgtcggaaaatgctgcgctt
aaggaagcacgattaactgaagctgaggccgaattggtgcggtcgcgtgctgcttgtgct
cgccttgaacaggagaaggagattgttgagaggcagaatgcttggcttaacgaggagtta
acggctaaagttaacagtttcaatgagctgcgcaagagacatactgaattggatactgat
ttgacttccaagcttgcagatgtagagagacaattcagtgaatgctctaaatctttagag
tggaataagggtagagtgaaggagctggaaataaagcttaaatctatgcaagaggaatta
attacagctaaagatgcagctgcagccaatgaagagcgattctctgctgagatctccact
gtcaataagcttaatgagctctataaagagagttcggaggagtggtctagaaaagcagcg
gaccttgagggtggggtaaaagctatggagtcatacctaaagcaagttgaagatgattat
aaagagaaacttgagaaggaatcatctgctagaaagcaggttgaaaaggaggctgctgat
ttgaaagaaaagcttgagaagtttgaagcagaaattgaggcaagcaagaagagtaatgaa
ctaattaatcttccactcagcagtttctctactgaaccgttgctgacatctattgtagct
gatggcatggttgaggaaaataacatgctagtgccaaaaattccttttggtgtttccgga
acagcattagccgcttcacttctgcgagatggatggagtttggcaaaaatgtatgcaaaa
taccaagaggctgttgatgcatttagacatgaacaattgggaaggaaggagtcagaggca
atattgcaacgggttctatacgagttagaggagaaagcagaagctataatagatgaaaga
gtggaacatgaaaagatggttgacacatactccttgatgagccaaaaattgcaaaactcc
ctcaatgataattcaaacttggagaaaaccattcaagaactgaaggctgacctcaaacgg
catgaacgagaatacaatcttgcacagaaagaaaatgacgaccttcgtaaacaggtcaca
gtacttttgaaggaatgccgagacatacaacttcgttctgggtcaaatggtaatgatgtt
gttgatgttgcatcaaatattgctttaaggacaagtagagggaccgaacctgaagatgtc
atatcagaccacattttaaccttcaaggacataaatggattagttgagcagaatgtccaa
ctcagaagccttgtacgcagtctttctggccaaattgaaaatcaggaggtggaatacaag
gagaagcttgaaatggagctaaaaaaacatactgaagaagctggttctaaagtcgcagct
gttcttcagagagcagaagaacaagggaacatgattgaatcacttcatgcatctgttgcg
atgtataagaggttgtatgaggaggagcatagtcttcatctgtctcatgcacattcttca
gaagctcttgcagctgtttcagaagttagaagaaacaatcttaagacttcaattgaaagt
tcacaggaaattgcaaagaaatccctggaaaaagctgctgagcgtgtaagatcccttgag
gatgatttagcaaagtctaggagtgagattattgtcttacgaacagaacgtgacaagata
ttgcttgaagcaaatttcgctagagagaggcttgatagctccatgaaggaaattgaacac
cagaaagctgaagcaaaaggaatcctagcaagaaatgtagagttttcccagctaattgtt
gactaccaacgcaagttgcgtgaaagctctgattcccttaatgctgctgaggagttgact
cggaaactttctatggagttgtcaattttaaagcatgaaaaggaagtcatatcaaatgct
gaaaagagagcttctgatgaggttcgcagtttatctgaaagggtgcagagcttgcaggct
agtttgagtaccatacagagtgccgaggaagttcgagaggaagcaagagctgctgagaag
gtaaaacaagaagaatatataaagaaattggagagggaatgggctgaggccaagaaagag
ttacaggacgagcgtgaaaatgtgcagagactcacactagaccgggagcaggccatgaaa
aattatatgagacaggttgaggatacacataaagagttagctaatgcattgagcgcagtt
gcatctgctgaatctagagcttctgttgcagaggtaaagctttccagccttcaaagaaaa
atgggtccctcaaatgaaaagcttgtcgaagtcgatggtgtgagtggaccttccacttta
tccagtgatgaggttgttgctgagttgcaaaccgcaaaggaggagattgaaaaacttaaa
gaggaggcgcaagctaacaaagctcatatgctgcagtataagagcattgctgaggtgaat
gaagatgcaatgaaacagatagaaattgctcatgataattacaagatagaggttgacaat
gcaaaaaaggcactagaacttgaagttcatgcacttagagagaaggtttcagagctcgaa
aatgaatcaagtttgaaatttgaagaagtggcatctgcaactgcaggaaaagaagaggct
cttacatctgcgctggctgaaatctcaaatctcaaagaagaaatcttaaacagatgttct
caaatttcagcaatggaacttcagatctctgatttaaaagaacagctggacaaggagcac
cagaaatggcgtgctgctcaaaccaattacgaaagacaggttattctccaatctgaaaca
attcaggagttgacaaaaacatcggaagcgctagctttgctgcaggaggaggcatctaaa
ctacgtacattagctgatgctcagaaaattgaaaatagggaattaaaggccaagtgggaa
gaggagaaggcaggtcttgagaggtccaagaatgatgctgagaagaaatatgatgaaatc
aatgaacagaataaaatactacatagccaacttgaggctttgcatattcaatgggctgag
aaggagcgtaatgcagctggaatttcatctggaagtagcagtgcagatacatttagtgat
gctggccttcaaaatgttattagttatctccgacgttcaaaagaaattgcagtaacagaa
gtttcgttgttaaagcaggaaaaattgcgattacaatctcaacttgagagtgctttgaag
gcatcagagtctgcgcatgcatctctagaagctgagcgtgcaaaatcaagatcatttttg
ttttctgaagaagagttcaaatcattgcagcttcagctcagggaaataaacttgcttcgc
gagagtaatgtgcagctcagggaagaaaataagtacaattttgaggagtgtcagaaattg
cgtgaagtagcacagaaagcaagagttgagacagagaatctagagaatcttctaagggaa
agagaaattttgctggaaagtcacaataaagaaattgaaacactaaaattggaaaaagat
aatctcaattacaaggttactgagttgcttgaaaggtgtaaaaatgttgacgtggaggat
tatgatcgagtgaagaaacttgttagagatttgcaggataaattgagagatagggatgct
cagattgaggaaactgctaaagttctttcagaaaagcaggattctgtttcacgtctagag
caagacctttccaattgcagatcagagcttatggagagggagaaaagaattaacgacatt
ctgcatactgaggctaacctaaaacaggatacggagaagcataggaaattgctggctcag
tttaagaagaagatagatgctttgtcaagggaaaaggaagacctagttaaagaaaatcag
caactttctaaacaattggatgaaattaaaggtaaaaggttgacaagtgatacaactgct
gaacaagcaatgaaggaggaaatggacaccagaatacagactctggaaaaaacagtggca
agactaagagatgaagtaaagaaggagagggaagacaagaatatggagagaaacaggaga
ttgaagactgaaaaggccataaaagactcttacaacaatgttgagcaggagaaaaaacag
tttattaatgaacttgagaggcataaggaagctctgaagcggttatcagatgaagtggaa
aaacttaagattgttgttggcaatcttcccgagggatccgatgtagcccaacttctttct
ggacccaatgtcgatgacttctctgctatttatatgtccgctgttgaaaattttgaaaag
gtagctcaatcagtaattagcgagtttggaggccgtggcaatcttggagatgcaacagca
actacagatggttcagcagctgctacaggttctgtggtccatgctcaatctcaaagcatt
atacccttggcggcctctggaacaagcaacttaccacctaaagccactggggaaagtgag
aaaagacttgcattgcctaaatctgttgttgaaactcgtaaggcaggtaggaggttggtc
aggccacgacttgtaaaacaggatgagccacaaggtgatgtagaaatgtctgaaactgaa
gggctagggggcaaacctgggccttctagtgacacagaaacacaaagcaatttggctcta
tcatctcaaccattggctcgtaaacgtgttgctcctacctccacttctgaactacttgaa
gaatctgtagctcctggtgacaagagctctgaacctttggtaaagaagtctagaggagta
gagtcccaagaagagactggcgaagaaccacctgctgcaacttcagaatttagtggcagt
cacccagcaactgaagaatcatttgaaagtggggagctgcctcaaggccaaaatgaggaa
ctcggtgatgctcaaaatgatgacggtgagactgctgttagtaaagatgaggagtcgaaa
gatccgcaacagttcgatggtactacgagtcaagaggaattacaaggtgacaagactgga
atttcagaagagaatccagatcaatccgctgaagcaaaaatactctctgatgagatgcag
atggatcaccctgagccagacaaccagcagccgggtagtgacagagaggagggagaaatg
ttgccagagaccggagattctgaaggtgaaccccaagaatctcgggaaggtccatctgac
cctgttgcatcccctgaaccttccccggctagggttgatgatgaaggtttagaggctggt
gagatcaattctcctgatctgtcgagtgaggataagaatgatgagggtgacttggttgag
gaggcagctgatggttcggataagttaattgatgttaacgaaactacatcagttgagagt
gatccggtggctgagcctgcgcctgttgcgagtgagagtactttgacgagtggtgctgct
gaaagtagctcctccaaatcaaacttacctgttccaaagcaagggaccaccggtacaccc
tctgaaactggagagtcaaggcaggcatcaccaattaatccatcaacgacaataaactta
caagagcgagcccggcagagggctcaattgagacaggcaggacaggaaagggcgacttct
gccactcctagaggtcgtggaagacctaatatccgtggcggtcgaattgttcgaggtcgt
ggtggacggcgtccgccgcctcatgctgatgcttga
DBGET
integrated database retrieval system
