Lotus japonicus: 130748818
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Entry
130748818 CDS
T04348
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
lja03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130748818
03450 Non-homologous end-joining
130748818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
130748818
03400 DNA repair and recombination proteins [BR:
lja03400
]
130748818
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
130748818
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
130748818
BRCA1-C complex
130748818
NHEJ (non-homologous end-joining)
MRX complex
130748818
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
130748818
NCBI-ProteinID:
XP_057458045
LinkDB
All DBs
Position
3:complement(8683087..8692522)
Genome browser
AA seq
714 aa
AA seq
DB search
MAEAEATDTLRILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEEKQVDFMLLGGDLFH
ENKPTRSTLVKAIEILRRYCLNDRPVPFQVVSDQTLNFQNTFGHVNYEDPHFNVGLPVFT
IHGNHDDPAGVDNLSVVDILSACNLVNYFGKTVLGGSGVGQITLHPILIKKGSTAVALYG
LGNIRDERLNRMFQTPHAVQWMRPESQEGCQVSDWFNILVLHQNRVKMNPKNAINEHFLP
RFLDFIVWGHEHECLVDPQEVSGMGFHISQPGSSVATSLIDGESKPKHVLLLEIKGNQYR
PTKIPLKSVRPFEYTEIILKDEPDIDPNDQHSILEHLDKVVGKLIEKSSKQAVHRAELKL
PLIRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKSAKKAKNEGKIDDSERLRPEE
LNQQNIEALVAENNLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQNNIVETRNKIAKDS
DNLQFDNEDLVVKVGECLEERVKERSVLSKEPTQFTAGAQSLEDFRAAGAGSAVSFSDDE
DAMPMSSSKPSTRGRRGSSSTSQTQTRGRGRGRGRGKDSSTLKQTTLDGALGFRSSQRSA
SVAASTAIRSVADGGDNLASASSDDAIQNAVEGVDDSSENESKLPGRKRAAPKGRGRGSN
QPSNSKRGRKSENSSVHRMLMNNDDDDDDDDDNVRKRLNKSQPRVTKNYGALRR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagccgaagccacggacacgcttcgcatactggtagccaccgactgccacctc
gggtacatggagaaagacgaggtgcgccgccacgactcattccaagcattcgaagagatt
tgctccatcgcggaggagaagcaggtcgacttcatgctactcggcggtgacctcttccac
gagaacaagccaactaggtcaacgttagtcaaggccattgagattctccgtcgctattgc
ctcaatgatcgacccgttcccttccaagttgttagtgaccagacccttaatttccagaac
acgtttggtcatgtgaattatgaagatcctcactttaatgttggcttgccggtttttacc
attcatggaaatcatgacgatcccgcaggcgtggacaacctttctgttgttgatattctc
tcggcatgtaatcttgtcaactactttgggaaaacagttcttgggggttctggtgttggt
cagatcactctacaccctattcttatcaagaagggttcaacagctgtagctctgtatggt
ctggggaacattagagatgaacggcttaataggatgtttcaaacaccacatgctgtgcag
tggatgcgtcctgaatctcaggaagggtgtcaagtttctgattggttcaacattctggta
cttcatcagaacagagtgaaaatgaatccaaaaaatgcaataaatgagcacttcctgcca
cgcttcctggacttcattgtgtggggacatgagcatgaatgtttggttgacccacaggaa
gtttctgggatgggatttcacatttcgcaaccagggtcatcagttgcaacatcactaatt
gatggagaatcgaagccaaagcatgtacttcttttagaaattaagggaaatcaatatcgc
ccaactaagatacctttaaaatctgtgcggccttttgagtatacagagattatattaaaa
gatgagcctgatattgatcccaatgatcaacattctattcttgaacatctggacaaagtg
gtcgggaagcttatagaaaaatctagtaagcaggctgtccatagagcagaactcaagctt
ccactaattcgtatcaaggtcgactactctggatttatgactataaatcctcaaagattt
gggcagaaatatgtagggaaggttgcaaacccccaagacattcttatattctcgaagtct
gcaaaaaaggccaagaatgaaggtaaaattgatgattctgaacgtcttcgtccagaagaa
ttaaatcaacagaacattgaggctttagttgctgaaaataatctgaaaatggagatactt
cctgtcaatgatttggatattgcattgcacaattttgtgaacaaggatgataaaatggca
ttttacacttgtgtacaaaacaatattgttgaaacaagaaataaaattgctaaggattca
gataacctgcagtttgacaatgaagatttagtcgttaaagttggagagtgcttggaggaa
cgggtcaaggaacgatctgtactctccaaggaacccacacagttcaccgctggtgctcag
tcattggaggatttccgagctgctggagctggaagtgcggtttccttcagtgatgatgaa
gatgccatgccaatgtctagctctaagccaagcacaagaggccggagagggtcctctagt
acatctcaaactcaaaccagaggaaggggccggggcaggggcagaggcaaggattccagc
accttgaagcagacgacccttgatggagctttaggctttcgctcttcacagagatctgca
tcggttgctgcatcaactgccattcgaagtgttgctgatggtggggataacttggcatct
gcttcaagtgatgatgccattcaaaatgcggtcgaaggtgttgatgacagttcggaaaat
gaatctaagctgccaggacgcaagagggctgctccaaagggaagaggcagaggatctaac
cagccttctaattctaaacgtggaaggaaatcagaaaactcttcagtccatagaatgctg
atgaacaatgatgatgatgatgacgacgatgatgacaatgtcagaaagagattaaataag
tctcaacctcgggtgaccaaaaactatggagctctaagaaggtga
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integrated database retrieval system
