KEGG   Lotus japonicus: 130748976
Entry
130748976         CDS       T04348                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
lja  Lotus japonicus
Pathway
lja03020  RNA polymerase
lja03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130748976
  09124 Replication and repair
   03420 Nucleotide excision repair
    130748976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    130748976
   03400 DNA repair and recombination proteins [BR:lja03400]
    130748976
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     130748976
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130748976
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 130748976
NCBI-ProteinID: XP_057458212
LinkDB
Position
3:complement(10281187..10285759)
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggggaagaggaagaaaacgccgcagaactcaaaatcggagacgagtttttgaag
gcaaagtgcttgatgaattgtgaagtttcattgattcttgagcacaagtatgagcagctt
caacagtcatctgatgatcccatgaatcaagtttctcaggtatttgaaaagtcattgcag
tatgtgaaacggtttagccggtataaaaatcctgatgctgttagacaagtccgagaaatt
cttgccagataccaattggccgagtttgagctgtgtgtcctaggcaatctttgcccggaa
actgtggaggaagctattgctatggttccatctatcaagacaagaggacgggctcaggat
gatgaagcaattgagaaaatgttaaatgacctatcactcattaagaaatttgaataa

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