Lotus japonicus: 130749397
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Entry
130749397 CDS
T04348
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130749397
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
130749397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_21
CCDC39
Fez1
DUF745
FolB
MC7
AAA_27
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
130749397
NCBI-ProteinID:
XP_057458730
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Position
3:complement(14628527..14658906)
Genome browser
AA seq
1079 aa
AA seq
DB search
MAESRPPKRSKITRGEDDYMPGNILEIELHNFMTFDYLKCKPAPRLNLVIGPNGSGKSSL
VCAIALGLGGEPQLLGRATSIGAYVKRGEESGYIKITLRGDHKEERLIIMRKINTNNKSE
WLFNGNVVPKKDVAESIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKVVGDPQL
PEQHRALIDKSRALKHIELSLEKNEGTLKQLKERNAELEKDVERVRQRDELLAKAESMKK
KLPWLRYDMKQAEYREAKKRENDAEKALKEAAKLLSDLKEPIKKQKDEKAALDANCKKVS
SRLSDNAKKRMDLREKDSQLDVELQGKYKDMEELRGQEKSRQQKLEKARKELAAAELELE
NLHPFVPPKDELQRLKDEIRRLDTSASQVRQNRSQAESEIKHKKSLLMRCKERLRDMNNK
STKCLLALQKSGVDKIFEAYKWVQENRNQFNKEVFGPVLLEVNVPNREHARYLEGHVAYY
VWKSFMTQDSRDRDLLAKNLKFFDVPILNYTGGDGHPIRPFEISEDMRALGINSRLDQIF
DAPVAVKEMLIKNSSLDNSYIGTKETDQKSEVVPRLGIMDLWTPENHYRWSGSRYGNHVS
ASVEQVNPPDLLSNTSNVGEIEILLSEERELERQIAPLEESIKRSQDEERSLQNQAADLR
KQWETVSTTAQNEQRKRKEIVHRIEQRKGILKSMEEKVDMDTEIAKLVEQATKCNIQRFH
NSIKIKDLLVEAMGYRQNVVELRMSLIEFEAKIGEMEANLKQHDKFALQASLHFDNCKKE
AENCKQQLTDSLNYAKSIARLTPELEKEFLEMPTTIEELEAAIQDTTSQANSILFVNHNI
LEQYEHRQRQIEDLAAKLEADKNECRRCLAELDNIKGKWLPTLRNLVAQINETFRCNFQE
MAVAGEVSLDEHDTNFDQFGIHIKVKFRENGQLQILSAHHQSGGERSVSTIVYLVSLQDL
TNCPFRVVDEINQGWLLFGVNCFWIDLTRSRDLYLTLFLPGMDPINERKMFQQLVRAASK
PNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTTGDPWSIITGHVRQTLC
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatctcgcccccctaagcgctccaaaatcaccaggggagaagatgattatatg
cctggaaatattcttgagattgagcttcataatttcatgacctttgattacttaaaatgt
aaacctgcgcctcgattgaatcttgtaattgggcccaatggttctggaaagagttctctt
gtatgtgctattgctcttggcctcggtggagagccccagctgcttgggcgagccacaagt
attggggcatatgtgaaacgaggagaagagtctggctacattaagattaccttgagaggg
gaccataaagaggagcgccttatcattatgcgtaaaataaatactaacaacaagtctgaa
tggttgttcaatggaaatgtagtacccaaaaaggatgttgctgaaagcattcagaggttt
aacatccaagtcaataatttgactcaatttttaccgcaagacagggtatgtgagtttgcg
aagttaactcctgtccaacttctggaagagactgaaaaggttgttggtgatccacagctt
ccggagcaacatcgtgcactaattgataaaagtcgtgcattgaagcatattgagctgtct
cttgagaaaaatgaaggaactttaaaacagttgaaggaacgcaatgccgaattagagaag
gatgttgaacgcgttcgtcaaagagatgagcttcttgccaaggctgagtcaatgaagaag
aaattgccatggctgaggtatgatatgaagcaggctgaatatcgggaagctaagaaacgt
gagaatgatgctgaaaaggcattgaaggaagctgcgaagttattaagtgatcttaaggaa
cctattaagaaacagaaagatgagaaggctgcattagatgcaaattgtaaaaaggtaagc
agccgcttaagtgacaatgcgaagaagcgaatggaccttagggagaaagatagccaattg
gatgtggaattacaaggaaagtacaaagatatggaagagttgagggggcaggaaaaatct
cgacaacaaaaacttgaaaaagccaggaaggagcttgctgctgcggaattagaacttgag
aatctacacccttttgtacctccaaaggatgagctacaaagactgaaagatgaaattcgg
aggttggatacttctgctagtcaagtgagacagaataggtcacaagcagaaagtgaaata
aaacataaaaagtcactcttgatgaggtgtaaagagagattgagggatatgaataataaa
agtaccaagtgtttgcttgcattgcaaaaatctggggttgacaaaatttttgaagcttat
aaatgggtccaagaaaatcgtaatcaattcaacaaggaagtctttggtccagttttactt
gaggtgaatgtcccaaaccgggaacatgcccggtatctggagggtcatgttgcttactac
gtctggaagtctttcatgacacaagattctcgtgatcgggaccttttagcgaaaaaccta
aagttctttgatgttccaattctaaattatactggtggtgatggccacccaataaggcct
tttgaaatttctgaagatatgcgtgctcttggcatcaattcccgattggaccaaattttt
gatgctccagttgcagtcaaggagatgctgattaaaaactcaagtctagataattcatat
attggaaccaaagaaactgatcagaaatctgaggtggttccaagattgggaattatggat
ttatggacaccggaaaatcactaccgttggtctgggtcaagatatggaaatcatgtgtcc
gcaagtgttgaacaagtgaaccccccggatcttctatccaatacttcgaatgtgggagaa
attgagattttgctttccgaagaaagggagcttgaaagacaaattgctcccttggaggaa
agcatcaaaagatctcaagatgaggaaagaagcttacagaatcaagctgctgatctccgt
aaacagtgggaaaccgttagtactacggcacagaatgagcaaagaaaacgtaaagaaatc
gttcaccggattgaacaaaggaaagggatactgaaatcgatggaggagaaggttgatatg
gatactgagatagcaaagcttgttgagcaggctacaaaatgtaacattcagcgatttcac
aattcaattaaaattaaggatcttcttgttgaagctatgggttacaggcagaatgttgtt
gaactacgtatgtcgttaattgaatttgaagcaaagattggagaaatggaggccaatctg
aagcagcatgacaagtttgctctgcaagcatcattgcactttgataactgtaagaaagag
gctgagaattgtaagcagcagcttacagattccttgaactatgctaaatcaattgctcgg
cttacacctgagctagagaaggaatttcttgagatgcccactacaatagaggaattggaa
gcagctatccaagataccacttctcaagccaattcaatcctttttgtcaatcataacata
ttggaacaatacgagcatcgtcaaagacaaatagaagatcttgcagcaaaacttgaagca
gacaaaaatgaatgtagaaggtgtttagctgaattagataacattaaggggaaatggctt
ccaacactgagaaaccttgtagcccagataaatgaaacctttagatgtaattttcaagag
atggctgttgccggagaagtctcactagatgagcatgatacgaacttcgatcaatttgga
atacatataaaagtcaaattcagagaaaatggacagcttcaaattctcagtgcccatcat
caatctggaggggagcgatcagtttcaactattgtttatcttgtttcccttcaagatctt
actaactgcccatttagagttgttgatgagatcaaccaaggttggttactgtttggagta
aattgtttctggattgacctcactcgctcaagagacctttatttgactttatttttacca
gggatggacccaataaatgaaaggaagatgttccagcaactagtgagagcagcaagcaag
ccaaatacaccacaatgtttcttgcttacccctaaattgctaccagatcttcaatatagt
gaggcatgcagcatattgaatgtaatgaatggcccttggatcgagcaaccatcgaaggtg
tggaccactggtgatccctggagtattataacgggacatgtcagacagaccctatgttaa
DBGET
integrated database retrieval system
