Lotus japonicus: 130749478
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Entry
130749478 CDS
T04348
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130749478
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130749478
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF5826
Motif
Other DBs
NCBI-GeneID:
130749478
NCBI-ProteinID:
XP_057458830
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Position
3:1072927..1077992
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AA seq
410 aa
AA seq
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MLFKSTPMFDIMKLLFSVLMVLSMLTPGLSSTTTFNVLKYGAVGDGKTNDSPAFLKAWTD
VCQSNSDVSQLIIPAARTFLLKPITFAGPCKSKYILIQLSGNIVAPTKSGFSGSHLNTWL
GFKSINGLAISGKGTIDGQGSAWWKQPCLGNPIPGTECRPPTALTFNRCYRLQLKGFTSI
NPPRSHITLTSCKKAIIKNLHLIAPGESPNTDGIDISGSRDIQVLNSFIGTGDDCIAVSA
GSSLIKITGITCGPGHGISIGSLGGSGEFDTVEDVHVKNCTLTETLTGVRIKTIKGGGGF
ARRISFEGIRFVRANNPIIIDQYYCVNGMKCETKDQAIKVSDVTFRGITGTSLMDKVINL
NCDQNVGCSNIVFEKVYIASAVPGMKVFSFCHNAHGTASHVKPSLNCLLK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcaagagcactcccatgtttgatatcatgaagctccttttctctgttttaatg
gttctgagtatgctcactcccggattgagcagcactacaactttcaatgttttgaaatat
ggagcagttggagatggaaaaaccaacgattcccctgcctttctgaaggcgtggacagat
gtttgccaaagcaactcagatgtatctcagctcataataccagccgcaaggacattcttg
ctgaaaccaataaccttcgctggtccatgcaaatctaaatatatcctcattcagctttca
gggaacattgttgcacctacaaaatcaggattttctggatctcacctaaacacatggctt
ggcttcaaatccatcaatggtttagctatcagtggaaaagggacaattgatggtcaaggc
tctgcctggtggaagcaaccttgcttaggaaatccaatacctggtacagagtgccgtcca
ccaacagcattaacattcaatagatgctatcgccttcagctcaaaggatttacaagcatt
aatcccccaagaagccatataactctaacaagctgcaagaaggccattatcaaaaacctc
catttaattgctcctggagaaagccctaatactgatggcattgatatttctggctcaagg
gacattcaagtgcttaattctttcattggaacaggtgatgattgcattgctgttagtgct
ggatcatccctaatcaaaataactggtataacatgtggtccaggccatggtatcagcatt
ggatcattgggaggaagtggagagttcgacactgtagaggacgtgcatgtgaagaattgt
acactgactgaaacattaacaggagtaaggatcaagacaataaagggtggaggtggattt
gcaaggaggatctcatttgaagggatcagatttgttcgagccaataatcccattatcatt
gatcagtattactgcgtcaatggaatgaagtgtgaaaccaaggatcaagcgatcaaggtg
agtgatgtaactttcagaggaattactggaacatcattgatggacaaggtgatcaatttg
aactgtgaccagaatgtggggtgctccaacattgtgtttgaaaaagtttatatagcatct
gcagttcctgggatgaaggttttctctttctgccacaatgcccatggaacagcttcccac
gtcaaaccatctttaaattgcttgctcaagtag
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