Lotus japonicus: Lj0g3v0146199.1
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Entry
Lj0g3v0146199.1 CDS
T04348
Symbol
Lj0g3v0146199.1
Name
(Kazusa) -
KO
K14306
nuclear pore complex protein Nup62
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Lj0g3v0146199.1 (Lj0g3v0146199.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
Lj0g3v0146199.1 (Lj0g3v0146199.1)
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Lj0g3v0146199.1 (Lj0g3v0146199.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
FapA
Motif
LinkDB
All DBs
AA seq
619 aa
AA seq
DB search
MSGFAFGSSSSSTSSSSSSSSSSSPFSLSNPSSASPFSFGSSSLFSSTTTNPTASSAPFS
FSSSASSAPSFSFGSKPSLFTSSSASAAPPSTAPSIFGAAAATSASTTPLFGGASSASTA
PLFGGTSSSTTLFGGTPSATTPFASFGVSSSSSSSAATTTTSLFSNAFATGASPLGSSSS
AAATTSLFSTAFGTGAASSSSSTTSFSAFGKPSTPATSVTATTSSSTSGFSFGTPTSSAS
QPSFAFNNAASASASASTASAASGTPASKQPGSFSFATSSAPLFSTVTTTTASTPASGVS
SLSSSGPAFGAPAASTAPTTVASSAAPTAPASAPSSISTASFGSGFSFATKASSTPAVST
VTTSAFGVSASTSTAPAISTSSTGATQTSSAVVVASTSGTTSTVSTSVAATPKLPSEITG
KTVEEIIKEWNAELQERTGKFRKQANAIAEWDHRILRNRDVLLRLEIAVAKVVETQSNLE
RQLELIETHQQEADKALQSMEEEAERIYKDERGLLLDDEAASTRDAMYEQSELIERELEH
MTEQIKSIIQSLNSNQGGELDAADGMNPLDAVVRILNNQLTSLMWIDEKAEEFSSRIQKL
SNQGSASDRELTGPGMWMS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttcgcattcggatcctcttcttcttctacatcatcatcatcatcatcatct
tcatcttcctctccattttcactctcaaacccttcctctgcttccccattctcatttgga
tcctcctccctcttctcctccaccaccactaaccctaccgcctcctccgcccccttctcc
ttctcctcctccgcttcttctgcgccctccttttccttcggctccaagccctccctcttc
acctcctcctccgcgtccgccgctccgccgagtaccgctccctcaatcttcggtgccgcc
gccgccacctcagcttcaacgactccactgtttggaggagcctcctccgcttcaacggcg
ccgctgtttgggggaacgtcttcttcgacgacactctttggcggaacaccttctgcaacg
acgccgtttgcgtcgtttggggtttcgtcatcttcttcttcttcagctgcaactaccacc
acatctttgttctccaacgcatttgccactggtgcttctccgttaggttcttcttcttct
gctgcagctacaacttctttgttctcaactgcatttggtaccggtgctgcctcttcttcg
agctcaacgacgtcgttttcagcgtttggaaagccgtctactccggctactagtgtgact
gcaacgacgtcgtctagcacttcaggattctcgtttggaacccccacttcctctgcttct
caaccttcgttcgccttcaacaatgcggcatctgcttcggcttcagcttcaaccgcttct
gcagcttctggcacgccggcctcgaagcaaccgggttctttctcttttgccacgtcttca
gcgccgctgttctccaccgtgacgaccaccacggcttcaaccccggctagtggtgtctcc
agcctgtcatcttctgggcctgcatttggtgccccagctgcgtctactgcccctacaact
gttgcctcatctgccgcgccgacagctccagctagtgctccttcctctatttccacagct
tccttcgggtctgggttttcctttgcgacaaaggcttcttcaacacctgcagtttccact
gttactacttctgcatttggggtgagcgcttcaacctctaccgctcctgcaatttccact
tccagcactggtgcaactcagacatcatctgctgttgttgtggcttccactagtggaact
acttcaactgtcagcacgtcggttgctgctacaccaaaactaccatctgaaatcactggg
aagactgtggaggagattatcaaggaatggaatgctgagttgcaagagcgaactggaaaa
tttagaaaacaagctaatgctatagctgaatgggatcacaggattttgcggaatcgtgat
gttctgttgaggcttgagattgccgtggcaaaagtagttgagacacagtcaaatttggag
cggcaattggagttgatagagactcatcagcaggaggctgataaggctttacaaagcatg
gaggaagaagctgagcgtatttacaaggatgagcgaggattacttcttgatgatgaagct
gcatctacaagagatgcaatgtatgaacagtctgaattgatagaaagggaactagagcac
atgacagaacagataaaatcaattatccaatcccttaactcaaaccagggcggagaactc
gatgcagctgatggaatgaatccattagatgctgtagttcgaattctaaataatcaacta
acttctctgatgtggattgatgaaaaggctgaagaattttcttcccgcattcagaagcta
tctaaccaaggttctgcttcagatcgtgaactgacgggtccaggaatgtggatgtcctga
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