Lotus japonicus: Lj4g3v1719690.1
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Entry
Lj4g3v1719690.1 CDS
T04348
Symbol
Lj4g3v1719690.1
Name
(Kazusa) -
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lja03036
]
Lj4g3v1719690.1 (Lj4g3v1719690.1)
Enzymes [BR:
lja01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
Lj4g3v1719690.1 (Lj4g3v1719690.1)
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
Lj4g3v1719690.1 (Lj4g3v1719690.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
LinkDB
All DBs
AA seq
645 aa
AA seq
DB search
MESGQRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAED
EQLLSVHTKKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKR
VASRELHSAVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDI
HHGNGTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRC
GDADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLA
EGRVVLVLEGGYNLDSIAKSMHACLEVLLEDKPLIGSSEAYPFESTWRVIQAVRQELSPF
WPTLACELPQKLISQIAPPPDSLISSSDSETEDDKGQINSEKLAELLEDVIKPLSKLNVD
ADEETDASSSWRSELSNVCIWYASYGSNMWKSRLSCYIAGGQVEGMQKHCPGSVNKTLPK
EILWKTFPCHIFFGRDFSRSWGPGGVAFLNPERNMQHSTYLCLYKISLEQFNDILFHENG
LSLNAGSPLFDTTTLNTISVKEFDSQEIVKGGWYGNVVYLGKEQDIPIITMTCSLHDIER
FKSGKLPLRAPNKAYANTLIKGLVEGEQLSEDEAIAYIEAAAKSL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggtcaacggcgtgtgggtttactctacgacgagaggatgtgcaagcaccac
gtaccagacgacggttaccaccccgaaacccctgatcgcattagggttatctggaacaag
cttcaatccaccggaattactgaccggtgtgtgattttggaagccaagaaagctgaggac
gaacagttgctatcagttcataccaaaaaacatgttgatctcattaacaagattagctca
aagctatacgattcgcgtaggcttaagatcgcgcataaattggattctgtttacttcaat
gagggttcttcagaagctgcttatcttgctgctggctctgctatagaggttgttaaaaga
gtggcaagcagggagttgcattctgctgttgctgttgttagacctccaggtcatcatgca
gaaccaaatgaagccaagggattttgtctgttcaacaatgtggcagttgctgcatcttat
ctcttagatcaaaggccagacttaggggtaaagaaaattttaattgttgactgggacatc
catcatggaaacggtactcaaaaaatattcctggatgattctcgagttctattcttctcc
gttcacaggcatgaatttgggagcttttatccatctagtgatgatgggttttataccatg
attggaaaaggagcaggtgctggttataatataaatgtgccatgggagaatgggagatgt
ggtgatgcagactacattgcagtgtgggaccacattttgctccctgttgccaaagaattt
agtccagacataattatagtttctgctggatttgatgcagctgttggtgaccctctgggc
ggatgtcgtgtcacaccatttggttattctgttctgttaaaaaagttgctgcatctggct
gaaggtagggttgtactggttttagaaggaggttataatcttgattcaattgcaaaatca
atgcatgcctgtttggaagttttgctagaagacaagcctcttattggatcctcagaggcc
tatccatttgagtctacatggcgcgtcattcaagcggttcggcaggagttaagtcccttt
tggccaacacttgcctgtgaattaccacaaaaattaattagtcaaatagcaccacctccg
gattctcttatttcaagctctgactcagagactgaggatgacaagggccaaatcaattca
gaaaaacttgcagagcttcttgaggatgttataaaaccactttccaagctgaatgttgat
gcagatgaagagactgatgcttctagttcttggcgatcagagttgtcaaatgtttgcata
tggtatgcctcatatggatcaaatatgtggaagtcaagattatcttgttacatagcaggt
ggacaggtggaaggtatgcagaagcactgtcccggttcagtaaacaaaactctgccaaag
gagatcctgtggaagactttcccttgccatatatttttcggtcgcgatttctcccgttct
tggggtcctggaggggttgcgtttcttaatcctgagagaaacatgcagcacagcacctac
ttgtgcctgtacaaaatttcgctagagcagttcaatgatattttatttcatgaaaatggt
ttaagccttaatgctggttcacctttatttgatacaactaccctgaatactatctctgtc
aaggagttcgattctcaggagattgtcaagggtggttggtatggtaatgtcgtctactta
ggaaaggagcaggatattccaataattaccatgacgtgttcgcttcatgatattgagcgc
ttcaaatctggaaagctaccattgcgtgcgccgaataaagcatatgccaacaccttaata
aaagggttggtggagggagagcagctttcagaggatgaagccatcgcttacatagaagct
gctgctaaatcactatgattt
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