Lotus japonicus: Lj6g3v1946230.1
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Entry
Lj6g3v1946230.1 CDS
T04348
Symbol
Lj6g3v1946230.1
Name
(Kazusa) -
KO
K10609
cullin 4
Organism
lja
Lotus japonicus
Pathway
lja03420
Nucleotide excision repair
lja04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Lj6g3v1946230.1 (Lj6g3v1946230.1)
09124 Replication and repair
03420 Nucleotide excision repair
Lj6g3v1946230.1 (Lj6g3v1946230.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
Lj6g3v1946230.1 (Lj6g3v1946230.1)
03400 DNA repair and recombination proteins [BR:
lja03400
]
Lj6g3v1946230.1 (Lj6g3v1946230.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lja04147
]
Lj6g3v1946230.1 (Lj6g3v1946230.1)
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
Lj6g3v1946230.1 (Lj6g3v1946230.1)
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
Lj6g3v1946230.1 (Lj6g3v1946230.1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
Lj6g3v1946230.1 (Lj6g3v1946230.1)
Exosome [BR:
lja04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Lj6g3v1946230.1 (Lj6g3v1946230.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
LinkDB
All DBs
AA seq
768 aa
AA seq
DB search
MSLPTKRSASASSSPTTAAAAPMKKQKPLSSHSDSDSAAAALMPLDDDLKPSNAVGLMAA
NLARKKATPPQPPKKLLIKLHKAKPTLPTNFEEDTWAKLKSAICAIFLKQPDSCDLEKLY
QAVSDLCLYKMGGNLYQRIEKECEVHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQML
MIRGIALYLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIESERLGE
AVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRL
QEEHDRCLIYLDASTRKPLIATAEKQLLERHIPAILDKGFSMLMDGNRIEDLQRIYSLFS
RVNALESLRQAISSYIRKTGQGVVMDDEKDKDMVSSLLEFKASLDTIWEESFFKNEAFCN
TIKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDV
FEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESF
KQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRL
MWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIEDKELRRT
LQSLACGKVRVLQKTPKGRDVEDDDSFDFNDGFTAPLYRIKVNAIQLKETVEENTSTTER
VFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacgttctgcttctgcttcttcttcacccaccaccgccgccgcc
gctcctatgaaaaagcaaaagcccctttcctcccactccgactccgactccgccgccgcc
gcactcatgcccctcgacgacgatctcaaaccctccaacgccgttggtctcatggccgcc
aatctcgcccgcaagaaagctacccctcctcaaccccccaaaaaactcctcatcaagctc
cacaaagctaaaccaacattgccgacgaatttcgaggaggatacatgggcaaagctgaag
tcagctatttgtgcaatatttttgaagcagccggactcttgtgacttggagaagctttat
caggctgtgagtgatctctgcctttataaaatgggtggaaatctttatcaacggattgaa
aaggagtgtgaagtgcacatatctgcagcgctgcagtctttggtcggacaaagccccgat
ttggttgtttttctatctctagttgagagatgttggcaggacctttgtgatcaaatgttg
atgattcgtggtatagccttgtatctggacaggacgtacgtgaagcaaacagcaaatgtt
cggtcattatgggacatgggcttacaacttttccgtaaacatctttcgttgtctcctgaa
gtgcagcacaaaactgttactggtcttctaagaatgattgaaagtgaaagattaggtgaa
gctgtggatagaactcttctaaaccatcttttgaagatgtttactgctctaggaatttat
gcagaaagctttgagaagccattccttgaatgcacatctgaattttatgctgcggaaggt
atgaaatacatgcagcaatcagatgttccagattacttgaagcatgtggagactaggttg
caagaggaacatgatagatgtttgatctacttggatgcaagtactaggaagccattgata
gcaacagcagaaaaacaacttcttgaacgtcatatacctgccattcttgataagggtttc
tctatgcttatggatgggaatcgcattgaagaccttcagagaatttactcactcttttca
agggtcaatgcccttgagtcactgaggcaggccattagttcatacatcaggaaaactggg
cagggcgttgttatggatgatgagaaagataaagatatggtttcttcccttctggaattt
aaggcttctcttgacacgatatgggaagaaagctttttcaagaatgaagctttctgtaac
accattaaagatgcatttgagcatcttatcaatctccggcagaaccgacctgcggagttg
attgccaagtttttggatgagaagcttcgtgcgggtaataagggaacttcagaagaggaa
ttagagggcacacttgataaagttctggtgttattcaggttcattcagggcaaggatgtg
tttgaggcattttataagaaagatcttgctaaaagactgctgctaggaaagagtgcttct
attgacgcggagaaatctatgatctccaagttgaagaccgagtgtggcagccagttcaca
aacaaactggaaggaatgtttaaggacattgaattatcaaaagaaataaatgagtccttc
aaacagtcctcccaggcgagaacaaaacttccatcagggattgaaatgagtgttcatgtc
ttgacaactgggtactggccaacatatccacccatggatgttagacttcctcatgaattg
aacgtttaccaggatatttttaaagagttctatctaagcaaatacagtggaaggcgtcta
atgtggcaaaattcgttaggtcactgtgtcctgaaggcagattttcccaaagggaaaaag
gagttggctgtctccctgtttcagactgttgttctgatgctattcaatgatgccgagaaa
cttagctttcaagatatcaaggactctactagtattgaggacaaggaactgagaagaact
ctgcaatcacttgcctgtggaaaagttcgtgttcttcaaaagacgccaaagggtagagat
gtggaggatgatgattcatttgattttaatgacgggtttactgctcctctttaccggata
aaggtgaatgcaattcagttgaaggagaccgtggaggaaaatacaagcaccactgagaga
gttttccaagaccgtcaatatcaggttgatgctgctattgtgaggataatgaagactagg
aaagtgcttagtcacacacttcttattactgaactcttccaacagctcaagttcccaata
aaaccagctgatttgaaaaaaagg
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