Lactobacillus jensenii: BUE77_01830
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Entry
BUE77_01830 CDS
T04677
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lje
Lactobacillus jensenii
Pathway
lje03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lje00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BUE77_01830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lje03021
]
BUE77_01830
03400 DNA repair and recombination proteins [BR:
lje03400
]
BUE77_01830
Enzymes [BR:
lje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BUE77_01830
Transcription machinery [BR:
lje03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BUE77_01830
DNA repair and recombination proteins [BR:
lje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BUE77_01830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
APT14217
UniProt:
A0A5N1IE15
LinkDB
All DBs
Position
388625..392263
Genome browser
AA seq
1212 aa
AA seq
DB search
MFSLDGHLVNYGQHRTRRSFSHIKEVVKLPNLTDVQTESYKWFLNEGISEVFEDIMPIND
FSGKLSLDFVGYKLQDAKSTIDEARNHDANYAAPLRVTLKLTNHETGEIKTQDVFFGDLP
LMTRSGSFVINGAERVIVSQLVRSPGVYYNCDVDKNARQIFGATVIPNRGAWLEYETDAK
NISYVRIDRTRKLPISVLIRALGFGSDSEIQDIYGTNDTLQFTLEKDVHNNPADSRVAEA
LKEIYERLRPGEPKTTDSSRSLLFARFFDSRRYDLAPVGRYKINKKLSLKSRLLNQTLAE
TLADPDTGEIIAKKGTIVTHAVMETLEKYLDRDDFKMVTYTPSDEGVMQDPITVQEIKVF
SKVNPEREVKLISNGHINADVKCITPADILASINYFFALQDEIGSTDDIDHLGNRRIRRV
GELLQNQFRIGLARMERVVRERMSIQDPDTVTPQQLINIRPIVASVKEFFGSSQLSQFMD
QNNPLGELTHKRRMSALGPGGLSRDRAGYEVRDVHYTHYGRLCPIETPEGPNIGLINSMA
TYAIINKYGFIETPYRRVSWETHKVTDKIDYLTADVEDNYIIAGANTPLNEDGSFKENLI
LARHKDDNVEVTPDKIDYMDVIPKQVVSVTSACIPFLENDDSNRALMGANHQRQAVPLIN
PHAALVGTGMEYRAAHDSGDALVAEAAGVVEYVDADQIRIRREDGTLDKYELEKYRRSNA
NKNYNQTPNVKKGEKIVEGEVIANGPSMAEGELALGQNPLIAFMTWNMYNYEDAIMISER
MVKDDVYTSIHIEDYESEARDTKLGPEEITREIPNVGEDALKDLDEQGIVRIGAEVKDGD
ILVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVQNVEVFTREGGDE
LSPGVNTMVRVYICQKRKIQVGDKMAGRHGNKGTIAVVVPEEDMPFLPDGRPVDICLNPM
GVPSRMNIGQVLELHLGMAARQLGIHVATPVFDGADEDEVYNTLREAGMSKDGKTVIYDG
RTGEPFHNRVSVGIMNYLKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTYKSDDVVGRVKAYEAIVKGERIPKPGVPESFRVLVKELQSLGL
DIRVLDMDHKEIELRDMDEDSSEHLNIDTLSRLAEEQEKKKLAEEATKSEETTSEQSATS
SVDQASDDTVSK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttggacggacatttagtgaattacggtcaacaccggacaagacgtagtttt
tctcacattaaagaagtagttaaattacctaatttgactgatgtacaaaccgaatcatat
aagtggtttttaaatgaaggtattagcgaagtatttgaagatattatgcctattaatgac
ttctcaggtaagttatctttagactttgttggttacaagcttcaagatgctaagagtact
attgatgaggctcgtaatcatgatgcaaattatgctgctccacttcgtgttactttaaaa
cttactaaccacgaaactggcgaaattaagacacaagatgtattctttggtgacttacca
ttaatgactagatcaggttcatttgttattaatggtgcagaaagagttattgtttctcag
cttgttagatcacctggtgtttactataactgtgatgttgataagaatgcacgccaaatc
tttggcgctactgttatccctaaccgtggtgcatggcttgaatatgaaactgatgctaag
aatatttcttatgtacgtatcgaccgtactagaaaattacctatttcagttttaattaga
gcacttggttttggctcagacagtgaaattcaagatatttacggaacaaatgatactttg
caattcactttagaaaaggatgtacacaataatcctgctgatagtcgagttgctgaagct
ttgaaagaaatttatgaacgacttcgtccaggtgaacctaagacgactgattcatctcgt
tcactcttgtttgctcgtttctttgactcacgtcggtatgatttggctccagttggtcgt
tacaagattaacaagaagctttctttaaagagtcgcttacttaatcaaactttagcagaa
actttagcggacccagatactggtgaaattattgccaagaagggaactatcgttactcat
gctgtaatggaaactcttgaaaagtatcttgatcgtgatgactttaagatggttacatac
actccatctgatgaaggtgtaatgcaagatccaattactgttcaagaaattaaggtcttt
tcaaaagttaaccctgaaagagaagttaagttaatttcaaatggtcatattaatgctgat
gtaaaatgcattactccagcagatattttggcttctattaactatttcttcgctttacaa
gatgaaattggttctactgatgacattgaccacttgggtaacagacgtattcgtcgtgtt
ggtgaattattacaaaatcaatttagaattggtttagcacggatggaacgtgttgtacgt
gaaagaatgtcaattcaagatcctgatacagttactccacaacaattaattaacattcgt
ccaattgtggctagtgtcaaggaattctttggttcatcacaactttcacagtttatggat
caaaacaacccattgggtgaattgactcacaagagaagaatgtctgccttagggcctggt
ggtttgtcaagagatcgtgctggttatgaagttcgtgacgtgcactatactcactatggt
cgtttatgtccaattgaaactccagaaggtcctaacattgggttgattaactcaatggca
acatacgcaattattaataagtatggtttcattgaaactccatatcgtcgtgtttcttgg
gaaactcataaagttactgataagattgactacttaactgcagatgtagaagataactac
attattgccggtgccaacacaccacttaatgaagatggttcatttaaagaaaatcttatc
ttggctcgtcacaaagatgataatgtcgaagttacaccagataagattgactacatggac
gttattcctaagcaagtagtttctgtaacttctgcatgtattcctttccttgaaaatgac
gactctaaccgtgctttgatgggggctaaccaccaaagacaagctgttcctttaattaat
ccacatgctgctttggttggtactggtatggaataccgtgctgctcatgactcaggagac
gctttagttgctgaagcagctggtgtagttgaatatgttgatgctgatcaaattagaatt
cgccgtgaagatggtactttagacaaatatgaacttgaaaaataccgtcgctcaaatgca
aacaagaactacaatcaaactcctaacgttaagaagggtgaaaagattgttgaaggcgaa
gtaattgctaatggtccatcaatggctgaaggtgaattagccttaggtcaaaacccatta
atcgcattcatgacttggaacatgtacaactatgaagatgccatcatgattagtgaaaga
atggttaaggatgatgtatatacttctatccacattgaagattacgaatcagaagcgcgt
gacactaaattaggacctgaagaaattactcgtgaaattcctaatgttggtgaagatgca
cttaaagatttagacgaacaaggtatcgttagaatcggtgctgaagttaaagacggcgat
attttagttggtaaggtaactccaaagggtgttactgaattatcagctgaagaaagatta
cttcacgccatctttggtgaaaaggctcgtgaagttcgtgacacttcacttcgtgtacca
catggtggtggcggtatcgttcaaaacgttgaagtctttactcgtgaaggtggagatgaa
ctttcaccaggtgttaacaccatggttagagtttacatttgccaaaagagaaagattcaa
gttggggacaagatggctggtcgtcacggtaacaagggtactattgctgttgttgttcca
gaagaagatatgccattcttaccagatggtcgtccagtagatatctgcttgaacccaatg
ggtgtgccatcacgtatgaatattggacaggttcttgaattacaccttggtatggctgct
cgccaattaggtattcacgttgctactcctgtatttgacggggctgatgaagatgaagtt
tacaataccttacgtgaagctggtatgagtaaagacggtaagactgttatttatgatggt
cgtaccggtgaaccattccacaaccgtgtttctgttggtattatgaactacttgaaactt
gctcacatggttgatgacaagattcacgcacgttcaatcggaccttactcacttgttact
caacaaccacttggtggtaaagcacaattcggtggacagagatttggtgaaatggaagtt
tgggctcttgaagcttacggtgctgcttacactttacaagaaatcttgacttacaagtca
gatgacgttgttggccgtgtaaaggcatacgaagcaattgttaagggtgaaagaattcct
aagccaggtgtacctgaatcattccgtgttttagtgaaggaattacaatcattaggtctt
gatatccgtgttcttgatatggatcacaaagaaattgaacttcgtgacatggatgaagac
tcaagtgaacatcttaatatcgacactctttcacgtttagcagaagaacaagaaaagaag
aagttggccgaagaagctactaaatctgaagaaacaacttctgaacaaagtgcaacaagt
tctgtagatcaagcttctgatgatacagtttctaagtag
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integrated database retrieval system
