Lactobacillus jensenii: BUE77_01835
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Entry
BUE77_01835 CDS
T04677
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lje
Lactobacillus jensenii
Pathway
lje03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lje00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BUE77_01835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lje03021
]
BUE77_01835
03400 DNA repair and recombination proteins [BR:
lje03400
]
BUE77_01835
Enzymes [BR:
lje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BUE77_01835
Transcription machinery [BR:
lje03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BUE77_01835
DNA repair and recombination proteins [BR:
lje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BUE77_01835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Tgi2PP
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
APT14218
UniProt:
A0A5N1IDP8
LinkDB
All DBs
Position
392275..395943
Genome browser
AA seq
1222 aa
AA seq
DB search
MIDVNKFESMQIGLASPNKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPSKDWAC
ACGKYKGIRYRGIVCDRCGVEVTSSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDV
SPRALEEVIYFAAYIVIDAGDTDLEPKSLLTEAEYREKKAKFGNRFVAKMGAEAIKELLQ
NVDLDKEVKSLKAELQTATGQKRTRAIRRLDILNAFKDSGNKPEWMVMDTVPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLHAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVVGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVSPKLKFYQCGVPRP
MALELFKPFVMHELVKRGVATNIRNAKRKIDREDDDIWDILEYVIKERPVLLNRAPTLHR
LGIQAFEPVLVPGKSIRLHPLACEAYNADFDGDQMAIHVPLSDEAVAESRLLMLAAHHIL
APKDGKPIVTPGQDIVLGNYWLTQAERGREGEGMIFNSPAEATMAYANGDIHFHTRIGLA
ADSMPEKTWPKGYEHGVFVTTYGKMIFNQIFPKDFFYVNDPTQENLTHPLDVKYFLQPGE
DIHEKLDNMDLGTPFKKGFLSDAIAAVYKEYRVQRTSDFLDDMKELGYTACTTSGLTIGM
ADIPMVSDKDDIVAKAHKKVDVVSKQFRRGLITEQERHDRVISIWNACKDEVQSEVAGIF
DPRNPISVMADSGARGNISNFTQLAGMRGLMAAPNGGMMEIPVTSNFREGLTVLEMFMST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIIREADCGTDRGITVHAIKEGDEMIEPLF
DRLVGRYTARSVFDPETHEVIAPKGIMMDEELAQEIVDRGVKEVTIRSVFTCNTQHGVCQ
KCYGMNLATGEEVEVGEAVGTVAAQSIGEPGTQLTMRNFHNGGVAGAEDITQGLPRVQEL
FEARNPKGRATISEVTGVVASIEENPAEHTREITVEGKTDTRTYSVPYTASVAVAEGDEV
VRGDKLTLGSIDPKELIRVRDALTTEKYILSEIQKAYRMQGVEIADKHVEVMARQMLQKV
RVLDPGETDILPGELMDIGEFKDRNKEVIISGGIPATAQSVILGITKAALETNSFLSAAS
FQETTRVLTDASIRSKNDPLLGLKENVIIGKIIPAGTGMPVYRSMEPQADVPKPQAVYSI
ADIERQLAEENKIDLNSLNKNK
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
ttgattgacgtaaacaaatttgaaagtatgcaaattggccttgcttcacctaataagatt
agatcatggtcttatggtgaagttaaaaagccagaaaccatcaattaccgtactttgaaa
ccagaaaaagatgggttatttgatgaaagaatttttggtccatcaaaggactgggcttgt
gcttgtggtaaatacaagggtattcgttaccgtggtattgtttgtgatcgttgtggtgtt
gaagtaacttcttcaaaagttagaagagaacgcatgggtcacattgaacttgctgctcct
gtaacacatatttggtattttaaaggcattccatcaagaatgggattagttctagatgta
tcacctcgtgcacttgaagaagttatttactttgctgcatacatagttattgatgcagga
gatacagatttagagcctaaatcactattaactgaagcagaataccgtgaaaagaaggct
aaatttggtaaccgttttgttgctaaaatgggtgctgaagcaattaaagaattacttcaa
aatgttgatcttgataaggaagttaagagcttaaaagcagaattacaaactgctactggt
caaaagagaacaagagcaattcgtcgtttggacatcttaaatgcctttaaagattcaggc
aacaagcctgaatggatggtaatggatactgttccagttattccaccagacttacgtcca
atggttcaacttgaaggtggccgttttgcaacttctgaccttaacgatttgtaccgtcgt
gtaattaacagaaataaccgtttgaagcgtttgcttgatttacatgcaccaaatattatc
gtgcaaaatgaaaagagaatgcttcaagaagcggttgatgctttaattgataacggtcgc
cgtggtcgtcctgttgttggtcctggtaaccgtccacttaagtcactttcacacatgctt
aaaggtaagcaaggtcgtttccgtcaaaacttgcttggtaagcgtgttgactactcaggt
cgttcagttattgacgtttcaccaaaattgaagttctatcaatgtggtgttccccgtcca
atggctcttgaattattcaagccatttgtaatgcatgaacttgttaagcgtggcgtagca
actaatattagaaatgctaagcgcaagattgaccgtgaagatgatgatatttgggacatt
cttgaatatgtaattaaggaacgtccagttcttttgaaccgtgcacctactttgcaccgt
ttaggtattcaagcttttgaaccagttttagtacctggtaagtcaattagacttcaccca
cttgcttgtgaagcctacaacgccgacttcgacggggaccagatggccatccacgtgcca
ctttcagatgaagctgttgctgaatcaagacttttgatgcttgcagctcaccacattttg
gctcctaaggatggtaagccaatcgtaacacctggacaggatatcgttttaggtaattac
tggttaacgcaggcagaacgtggccgtgaaggtgaaggtatgatcttcaattcaccagca
gaagcaactatggcttatgcgaatggtgacattcacttccacactagaattggtttagct
gctgattcaatgcctgaaaagacttggccaaagggttacgaacatggtgtgtttgtaact
acttacggtaagatgatctttaaccaaatcttccctaaggactttttctatgtaaatgat
ccaactcaagaaaacttaactcatccattagatgtgaagtatttcttacaaccaggtgaa
gacatccatgaaaaattagataacatggatttgggtactccatttaagaagggcttcttg
tcagatgcaattgcagctgtttacaaggaatacagagtgcaaagaacttctgacttctta
gatgacatgaaagaacttggatatactgcatgtaccacctcaggtttaactattggtatg
gcagatattcctatggttagcgataaagatgacatcgttgccaaggctcacaagaaagtc
gatgttgtttctaagcaatttagacgtggtttaattactgaacaagaacgtcacgaccgt
gtaatcagcatttggaatgcatgtaaggatgaagttcaaagtgaagtagcaggaatcttc
gatcctcgtaatccaatttcagtcatggccgattcaggtgcccgtggtaacatttcaaac
tttactcagcttgctggtatgcgtggtttgatggccgctcctaacggtgggatgatggaa
atccctgttacttcaaacttccgtgaaggtttgactgttttggaaatgttcatgtcaact
cacggtgctcgtaaagggatgactgataccgccttgaagactgccaactcaggttacctt
actcgtcgtttggttgatgtggctcaagacgttattattcgtgaagctgattgtggtacc
gaccgtggtattactgttcacgctattaaggaaggcgacgaaatgattgaaccattattc
gatcgtttggttggccgttacactgcaagaagcgtctttgatccagaaacacatgaagtc
attgcacctaagggcataatgatggatgaagagttggctcaagaaattgttgaccgtggt
gttaaggaagtaacaattcgttccgtatttacttgcaacacccaacacggtgtttgtcaa
aaatgttatggtatgaacctagctactggtgaagaagttgaagttggtgaagcagtaggt
actgtagctgctcaatcaattggtgaacctggtactcagcttacaatgcgtaacttccac
aacggtggggttgcaggtgctgaagatattactcaaggtcttcctcgtgttcaagaattg
tttgaagcacgtaatcctaaggggcgtgctactatctcagaagtaactggtgttgtagct
tcaattgaagaaaatccggcagaacatactcgtgaaattactgttgaaggtaagactgat
acaagaacgtactctgtcccttacactgctagtgttgcagttgcggaaggtgatgaagtg
gttcgtggtgacaagttaacacttggttctattgaccctaaggaattgatcagagttaga
gatgctttgactactgaaaagtacatcctaagcgaaatccaaaaagcctacagaatgcaa
ggggtagaaattgccgacaagcacgtcgaagtaatggcacgtcaaatgcttcaaaaggtt
cgggtacttgatccaggtgaaactgacatcttgccaggtgaattgatggatatcggtgaa
tttaaggacagaaacaaggaagttatcatttctggtggtattccagcaactgctcaaagt
gtaatcttaggtattactaaagccgctcttgaaactaacagtttcttgtctgctgcttca
ttccaagaaactacacgtgttcttactgatgcctcaatcagaagcaagaatgacccactt
cttggtcttaaagaaaacgttattattggtaaaattattcctgcaggtactggtatgcca
gtttaccgttcaatggaacctcaagctgatgtacctaagccacaagcagtatattcaatc
gctgatattgaacgtcaattagctgaagaaaacaaaattgacttaaatagtttgaataag
aataaataa
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integrated database retrieval system
