Lactobacillus jensenii: BUE77_05750
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Entry
BUE77_05750 CDS
T04677
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lje
Lactobacillus jensenii
Pathway
lje03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lje00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BUE77_05750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lje03019
]
BUE77_05750
Messenger RNA biogenesis [BR:
lje03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BUE77_05750
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_6
ODP
Phage_holin_8
DUF4453
Motif
Other DBs
NCBI-ProteinID:
APT14941
UniProt:
A0A5N1ICQ9
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Position
1182251..1183933
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AA seq
560 aa
AA seq
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MVRIKKDEVAVFAIGGLGEIGKNMYCVQYQDEIVIMDCGIKFPEDDLLGINYVISDYSYP
VKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALALIKGKLDEHGILKTTEL
HEEHEDTVLNFDKLSVTFFRTTHSIPDTLGIAVHTPLGAVIFTGDFKFDLTPVMNQPAPD
FQRMAKLGDEGVLALLSDSTNAEVSAFTKSERFVAKSLNNIIKGIDGRIIFATFASNLYR
VSTAVEAAIETGRKIAIFGRSMENGIQNGIDLGYLNVPKDLIVDANEINRLKPSEAMILC
TGSQGEPLAALSRIADGTHRQISIQPGDTVIFSSNPIPGNTLSVNHLINKLMEAGANVIH
GKVNNVHTSGHGGQEELKMMVRLAKPKYMIPVHGEYRMQVIHTHLAQDAGVPKENTFVLG
NGEVIAFSPEGSRIAGHIPAGDVFVDTSGTADVGNVVVRDRQILSEEGLVVAVATVDYKH
QRVLAGPDILSRGFVYMRESQDLISQAQKNVYHVLRTQMAKKPRPSENDIRKAIIANLQD
FLYARTERRPLVLPMIIEKK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggttagaataaaaaaagatgaagtagctgtttttgccattgggggtttaggtgaaatc
ggtaaaaatatgtactgcgttcaatatcaagacgaaattgtcatcatggactgtggtatt
aagttccccgaagatgatttactaggtattaactatgtaattagtgattattcataccct
gttaaaaatcgtaaaaaaatcaaggccttggttgtcagccatggccacgaagaccatatt
ggtgggattccattcctactagaaaaaattccggaaattccagtttacgcaacacctttt
gccttagctttaatcaagggcaaattggatgaacatggaatcttaaaaaccactgaactt
catgaagaacatgaagatacagttttaaattttgataagttatctgttacattcttcaga
actactcactcaattccagatacattaggaattgctgttcataccccattaggtgcagtg
atttttactggtgatttcaagtttgacttaaccccggtaatgaatcaacctgctccagat
tttcaaagaatggccaagttaggtgacgaaggtgtattagcattactatcagattcaact
aatgcagaagtatccgcatttaccaaatctgaacgttttgttgctaaatctctaaataat
attattaaaggaattgatggtcgtattatctttgcgacatttgcatctaacctttatcga
gtttcaaccgctgttgaagcagcaattgaaacgggaagaaaaattgctatctttggtcga
agcatggaaaatgggattcaaaacggaatcgatttagggtacttaaacgtacctaaagat
ttgattgttgatgctaatgaaatcaaccgcttaaagccaagtgaagcaatgattttatgt
actggatcacagggagaaccattagctgctctttcaagaatcgcagatggtactcaccga
caaattagcattcaacctggtgatacagtaatcttttcatcaaatccaattccgggtaac
accttatctgttaaccatttaattaacaagttaatggaagctggagcaaatgttattcat
ggcaaagtcaacaacgtccacacttctggtcacggtggccaagaagaattaaagatgatg
gtgcgcttagctaagccgaaatatatgattccagttcacggtgaatacagaatgcaagtt
attcacactcacctagctcaagatgcaggtgttccaaaggaaaacacctttgttttaggt
aatggtgaagtgatagcattcagtcctgaaggttcaagaattgctggtcatattcctgcg
ggtgatgtttttgttgatacttctggtactgcagatgttggcaacgtcgttgttcgcgat
cgtcagattttatctgaagaaggattagttgtggcagtagcaactgttgattataaacat
caacgtgtcctagctggcccagatattttaagtcgtggttttgtttatatgcgtgaatca
caagacttaatttctcaagcacagaaaaacgtctaccatgtattgcggacgcaaatggcc
aagaagccacgcccttctgaaaatgatattcgaaaggcaataattgctaatttacaagac
ttcttgtatgcccgtactgagcgtagaccgctcgttttaccaatgattatcgagaaaaaa
taa
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