Lactobacillus johnsonii FI9785: FI9785_1138
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Entry
FI9785_1138 CDS
T01120
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ljf
Lactobacillus johnsonii FI9785
Brite
KEGG Orthology (KO) [BR:
ljf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ljf03016
]
FI9785_1138 (rnz)
Enzymes [BR:
ljf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
FI9785_1138 (rnz)
Transfer RNA biogenesis [BR:
ljf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FI9785_1138 (rnz)
Prokaryotic type
FI9785_1138 (rnz)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
CAX67002
UniProt:
D0R4I9
LinkDB
All DBs
Position
complement(1072813..1073742)
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AA seq
309 aa
AA seq
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MEIQFLGTSAGQPSKSRNVSCTALKLLDELNEVWLFDVGEATQHQILKTNIRPRKVTRIF
ISHTHGDHIFGLPGFLSSRSFQGDGGPLTIYGPAGIEQFVQTSLRVSKTRVSYPIKYVVL
KENGLIFENDIFAVYTARLDHRVPSFGFRVVEKPRPGELLMDKVAEYNVPNGPLLGQLKA
GKTITLSDGQKLDGRDFLGEERPGRIVTIIYDTRPTKNIGELADNADVLVHESTFDGGEE
KMAHRYFHSTCLDAARVARDHNVGELYLTHISARYTGRAGRQLEHDARKIFKHTHLANDL
DNFEITLRG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacaatttttaggaacaagtgcggggcaaccatcaaaaagtagaaatgtttct
tgtaccgcactaaagttattagatgaattaaatgaagtatggctatttgatgtgggagaa
gcaacgcagcatcaaattttaaagactaacattagacctagaaaagtaacgcgaatcttt
atttcacatactcatggtgaccatatttttggacttccaggttttctctcatctcgttct
tttcaaggcgatggtggtccactaacaatttatggaccagctggtattgaacaatttgta
caaacttctctaagagtttctaaaactcgcgtatcatatccgattaagtatgtggtttta
aaagaaaatggcttaatttttgaaaatgatatttttgcggtctacacagctcgtttagat
caccgagtaccgagttttggctttcgtgtagttgaaaagccacgtccaggtgaattatta
atggataaagtggcagaatacaatgtgcctaatggaccgcttcttggtcaattaaaggcc
ggaaaaacaattacattaagtgatggtcaaaaactagatggacgtgattttcttggagaa
gagcgtccaggacgaattgtgacaattatttatgatactcggccaacaaaaaatattggt
gaattagcagataacgccgatgttctagttcatgaatcaacatttgatggtggagaagaa
aaaatggcccatcgctacttccattcaacttgcttggatgcagctcgagttgctcgagat
cataatgttggagagctttatttaactcacatttctgctcgctatactggaagagcgggt
agacaattagaacatgatgctagaaagatttttaaacatactcacttagctaatgatcta
gataattttgaaatcacattgaggggataa
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