Lactobacillus johnsonii FI9785: FI9785_1463
Help
Entry
FI9785_1463 CDS
T01120
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ljf
Lactobacillus johnsonii FI9785
Brite
KEGG Orthology (KO) [BR:
ljf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljf03019
]
FI9785_1463 (yhaM)
Messenger RNA biogenesis [BR:
ljf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FI9785_1463 (yhaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAX67322
UniProt:
D0R5F9
LinkDB
All DBs
Position
complement(1379610..1380587)
Genome browser
AA seq
325 aa
AA seq
DB search
MIKRLLDYNDGEDMNLVLLLKDSSLRTSKNGKQYLVLQFSDSSGTIRGNLWNASQQDADT
FSPGTIVELSGRREEYQDRPQIRIYDLRVVGPNEGYDLSQFVHSAPIKQKDLEEEINKRV
FEILNPTWNRIVRYLLKKWNKEFFSYPAGKSNHHAVRNGLAFHTVSMLRDAEGIANTYTQ
IDRSLLYAGCILHDMGKVIELSGPVATTYTAEGNLIGHLVLIDEQIMLAAHELKIDEHSE
DLMLLRHLVLSHHGLPEYGAAHRPVVLEAEVLHKIDDLDATVYAITNALQQTKPGEFTET
IKSQDNRRFYRPKNDDALDKTPKLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaggttgcttgattataatgatggcgaagatatgaatttagttttacttcta
aaagattcaagtcttcgtactagtaaaaatggtaaacaatacttagttttacaatttagc
gattcaagtggcacaattagaggaaatctttggaacgctagtcagcaggatgcggatact
tttagtccaggaaccatcgtggaattgagcggaagaagagaagagtatcaagatagaccc
caaataagaatttatgatttgagagtagtgggaccaaatgaaggatatgacttaagtcaa
tttgttcattcagctccaattaaacaaaaagatcttgaagaagaaattaataaacgtgtt
tttgagatcttaaatccaacctggaatcgaattgtccgctacttacttaagaaatggaat
aaagagtttttctcatatccagctggcaaatctaaccatcatgccgtcagaaatggacta
gcattccatactgtttcaatgctaagggatgcggaaggaattgctaatacttatactcaa
attgatcggtcacttctatatgcgggatgcattttacatgatatgggaaaggtaattgaa
ctatctggtcctgtagccacaacttatacggctgaaggaaatttgattggacacttagtt
ttaattgatgagcagattatgctagcagctcatgaattgaaaattgatgagcatagtgaa
gatttaatgctcttgcggcatttagttttgtcacatcacggcttacctgaatatggcgca
gctcatcgaccagtagtgctagaagctgaagttttacataaaattgatgatttagatgct
acagtttatgcaattactaatgctttgcagcaaactaagccaggagaatttactgaaaca
attaaatcacaagacaatcgtagattttacaggcctaaaaatgatgatgccttagataaa
acaccaaaattagagtaa
DBGET
integrated database retrieval system
