Lactobacillus johnsonii FI9785: FI9785_298
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Entry
FI9785_298 CDS
T01120
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ljf
Lactobacillus johnsonii FI9785
Pathway
ljf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ljf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FI9785_298 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljf03021
]
FI9785_298 (rpoE)
03400 DNA repair and recombination proteins [BR:
ljf03400
]
FI9785_298 (rpoE)
Transcription machinery [BR:
ljf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FI9785_298 (rpoE)
DNA repair and recombination proteins [BR:
ljf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FI9785_298 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Virulence_fact
HTH_CLF_N
Motif
Other DBs
NCBI-ProteinID:
CAX66182
UniProt:
D0R2M7
LinkDB
All DBs
Position
248088..248630
Genome browser
AA seq
180 aa
AA seq
DB search
MGLDDFQGQNKDELSMIEVARTILQDSGKRMAFADIVNAVQNFLGKSDEEIRERLPQFYT
DMNTDGEFISMGDNVWALRSWFPYESVDEEVNHPEDEEDVPRKKHHKKVNAFIGDSDDDD
IIDYDSDDPEDEDLDVDEEDTNEDDYSDDDLDDADDNELDDGIEGQLSELHQDDLDDDDE
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtggggttagatgattttcaaggccaaaataaagacgaattgtcaatgatcgaagttgct
cgtacaattttacaagatagcggcaagcgaatggcctttgctgatatcgttaacgccgtc
cagaactttctgggtaagagtgacgaagaaattcgtgagcgtttgccacaattttacact
gatatgaacactgatggtgaattcatttcaatgggtgataatgtttgggcattgcgttct
tggttcccatatgaatctgttgatgaagaagtaaaccatccagaagatgaagaagatgta
ccacgtaagaaacaccataagaaagttaatgctttcattggtgattctgacgatgatgat
attatcgactacgattcagatgatccagaagatgaagatttggatgttgacgaagaagat
actaatgaagacgactactcagatgatgatcttgatgatgccgatgacaatgaattagat
gatggtattgaaggccaattatctgaacttcatcaagatgatcttgatgacgatgatgag
taa
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