Lactobacillus johnsonii FI9785: FI9785_67
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Entry
FI9785_67 CDS
T01120
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ljf
Lactobacillus johnsonii FI9785
Brite
KEGG Orthology (KO) [BR:
ljf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljf03032
]
FI9785_67 (gyrB)
03400 DNA repair and recombination proteins [BR:
ljf03400
]
FI9785_67 (gyrB)
Enzymes [BR:
ljf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FI9785_67 (gyrB)
DNA replication proteins [BR:
ljf03032
]
Prokaryotic type
DNA Topoisomerases
FI9785_67 (gyrB)
DNA repair and recombination proteins [BR:
ljf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FI9785_67 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
CAX65955
UniProt:
D0R2Q0
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All DBs
Position
4230..6197
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AA seq
655 aa
AA seq
DB search
MAEDKSKAALNKAKDFEKRADTYNASQIQVLGGLEAVRKRPGMYIGSTSSQGLHHLVWEI
IDNSIDERLAGFATKIEITVNEDGSVTVQDDGRGIPVDIQAKTGRPALETVFTVLHAGGK
FGGGGYKVSGGLHGVGASVVNALSTKLDVTVMRDGKKYAISFDHGRVVGEMKQVGTVPLE
EHGTIVHFYPDPDIFTETTTFDDKILKNRIRELAFLNKGLKLTFTDKRKESAETDVYHFE
GGIKEYVAFLNKGQEVLFDEPIYVEGNYEGIDVEVALQYTNGYKTTLMTFANNIHTYEGG
MHEAGFKTALTRVVNDYAHKAKILKDKDDNLSGEDIREGITAVVSVKHPNPQFEGQTKTK
LGNSDARTAVDRAFSETFSRFLMENPSVGRKIVEKGQLAERARTAAKRAREVTRKKSGLE
IANLPGKLADNTSNDPSISELFIVEGNSAGGSAKQGRSRLTQAILPIRGKILNVEKASMD
RILANQEIRSLFTALGTGFGADFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYNYMRP
MIEKGYVYIARPPLYQVRQGKVEKYLDTDEELHDYLGTLQPSPKPVVQRYKGLGEMDPEQ
LWETTMNPENRRLDRVSPEYAEDADKIFDLLMGNEVGPRREFIEKNAKYVENLDA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagataagagcaaggcagcattaaataaagctaaagattttgaaaagcgtgct
gatacttataacgcaagtcaaattcaagttctaggcggacttgaagcagttagaaagcgc
ccaggtatgtatattggctcaactagtagccaaggcttacaccaccttgtttgggaaatt
attgataatagtattgacgaacgattagcaggatttgcgaccaagattgaaattactgtt
aatgaagatggcagtgttacagtccaagatgatggacgtggtattccggttgatattcaa
gctaaaacaggtcgtccagccctagaaactgtatttactgttttgcacgctggtggtaaa
ttcggcggtggcggatataaagtatctggtggtcttcacggtgttggggcttctgtagta
aacgccctctcaactaaacttgatgttacagttatgagagatggaaagaaatatgccatt
tcttttgatcatggccgtgtagtaggagaaatgaagcaagtgggtaccgttcctcttgaa
gaacatggaacaatcgttcatttctatcctgacccagatatttttaccgaaactacaact
ttcgacgataaaattttaaagaacagaattcgtgaacttgctttcttaaacaagggctta
aaattaacctttaccgataagcgtaaagaaagtgctgaaacggatgtttaccactttgaa
ggtggaatcaaagaatacgttgcctttttaaacaaaggtcaagaagtgttatttgatgaa
ccaatctatgttgaaggtaattatgaaggtattgatgttgaagttgcattgcaatacacc
aatggctataaaaccactttaatgacctttgcgaacaatattcacacctatgaaggtggg
atgcacgaagccggctttaagactgctttaactcgtgtagttaacgattatgctcataag
gctaaaatcttgaaggataaagatgataacttatctggtgaagatattcgtgaaggaatt
acagctgttgtatctgttaagcaccctaatcctcagtttgagggtcagactaagactaag
cttggaaactcagatgctagaactgcagtcgatcgagcattttcagaaacgtttagtcgt
ttcttaatggagaatccttctgttggtcgtaagattgttgaaaaaggacaacttgctgaa
agagctagaactgctgctaagcgtgcacgtgaagttacacggaagaagtcaggacttgaa
attgctaacttgccaggaaaattagctgacaataccagtaatgacccaagtatttcagag
ttatttatcgttgagggtaactctgccggtggatctgcaaagcaaggacgttctcgttta
acccaggcgattttgccaattagaggtaagatcttgaacgttgaaaaagcttcaatggat
agaattcttgctaaccaagaaattagatctctctttaccgctttaggtacaggatttggt
gctgattttgacgtttcaaaggcaagataccataaattgatcatcatgacagatgccgat
gtcgatggtgctcacattcgaactctgcttttgacgctcttttacaactatatgcgtcca
atgatcgaaaagggatatgtttacattgctcgtccgcctctatatcaagttcgtcaaggt
aaggtagagaaatatctcgatactgatgaagaattacacgattatttaggtaccttgcaa
ccaagtcctaagccagttgttcaacgctataagggactaggtgaaatggatccagagcaa
ttatgggaaactaccatgaacccagaaaatcgtcgtttagatcgagtaagtcctgaatat
gctgaagatgctgacaagatatttgacctcttgatgggtaatgaagtaggtccaagacga
gaatttattgaaaagaacgcaaaatacgttgagaatttagatgcttag
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