Lactobacillus johnsonii DPC 6026: LJP_0005
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Entry
LJP_0005 CDS
T01960
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljh03032
]
LJP_0005
03400 DNA repair and recombination proteins [BR:
ljh03400
]
LJP_0005
Enzymes [BR:
ljh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LJP_0005
DNA replication proteins [BR:
ljh03032
]
Prokaryotic type
DNA Topoisomerases
LJP_0005
DNA repair and recombination proteins [BR:
ljh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LJP_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AEB92344
LinkDB
All DBs
Position
4232..6199
Genome browser
AA seq
655 aa
AA seq
DB search
MAEDKSKAALNKAKDFEKRADTYNASQIQVLGGLEAVRKRPGMYIGSTSSQGLHHLVWEI
IDNSIDERLAGFATKIEITVNEDGSVTVQDDGRGIPVDIQAKTGRPALETVFTVLHAGGK
FGGGGYKVSGGLHGVGASVVNALSTKLEVTVMRDGKKYAISFDHGRVVGEMKQVGTVPLE
EHGTIVRFYPDPDIFTETITFDDKILKNRIRELAFLNKGLKLTFTDKRKESAETDVYHFE
GGIKEYVAFLNKGQEVLFDEPIYVEGNYEGIDVEVALQYTNGYKTTLMTFANNIHTYEGG
MHEAGFKTALTRVVNDYAHKAKILKDKDDNLSGEDIREGITAVVSVKHPSPQFEGQTKTK
LGNSDARTAVDRAFSETFSRFLMENPSVGRKIVEKGQLAERARTAAKRAREVTRKKSGLE
IANLPGKLADNTSNDPSISELFIVEGNSAGGSAKQGRSRLTQAILPIRGKILNVEKASMD
RILANQEIRSLFTALGTGFGADFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYNYMRP
MIEKGYVYIARPPLYQVRQGKVEKYLDTDEELHDYLGTLQPSPKPIVQRYKGLGEMDPEQ
LWETTMNPENRRLDRVSPEYAEDADKIFDLLMGNEVGPRREFIEKNAKYVENLDA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagataagagcaaggcagcattaaataaagctaaagattttgaaaagcgtgct
gatacttataacgcaagtcaaattcaagttctaggcggacttgaagcagttagaaagcgc
ccaggtatgtacattggctcaactagtagccaaggcttacaccaccttgtttgggaaatt
attgataatagtattgacgaacgattagcaggatttgcgaccaagattgaaattactgtt
aatgaagatggcagtgttacagtccaagatgatggacgtggtattccggttgatattcaa
gctaaaacaggtcgtccagccctagaaactgtatttactgttttgcatgctggtggtaaa
ttcggcggtggcggatataaagtatctggtggtcttcacggtgttggtgcttctgtagta
aacgccctctcaactaaacttgaggttactgttatgagggatggaaagaaatatgcaatt
tcttttgatcatggccgtgtagtaggagaaatgaagcaagtgggaactgtacctcttgaa
gaacatggaacaatcgttcgtttctatcctgatccagatatttttacagaaactataact
ttcgacgataaaattttaaagaacagaattcgtgaacttgctttcttaaacaagggctta
aaattaacctttaccgataagcgtaaagaaagtgctgaaactgatgtttaccactttgaa
ggtggaatcaaagaatacgttgcctttttaaacaaaggtcaagaagtgttatttgatgaa
ccaatctatgttgaaggtaattatgaaggtattgatgttgaagttgcattgcaatacacc
aatggttataaaactactttaatgaccttcgcaaacaatattcacacctatgaaggcggg
atgcacgaagccggctttaagactgctctaactcgtgtagttaacgattatgctcataag
gctaaaatcttgaaggataaagatgataacttatctggtgaagatattcgtgaaggaatt
acagctgttgtatctgttaagcaccctagtccccagtttgaagggcagactaagactaag
cttggaaactcagatgctagaactgcagtcgatcgagcattttcagaaacgtttagtcgt
ttcttaatggaaaatccttctgttggtcgtaagattgttgaaaaaggacaacttgctgaa
agagctagaactgctgctaagcgtgcacgtgaagttacccgtaagaaatcaggacttgaa
attgctaacttgccaggaaaactagctgacaataccagtaatgatccaagtatttcagag
ttatttatcgttgagggtaactctgccggtggatctgcaaagcaaggacgttctcgttta
acgcaagcaattttgccaattagaggtaagattctgaacgttgaaaaagcttcaatggat
agaatccttgctaaccaagaaattagatccctctttaccgctttaggtacaggatttggt
gctgattttgacgtttcaaaggcaagatatcataagttgatcatcatgacagatgccgat
gtcgatggtgctcacattagaactctgcttttgactctcttttacaactacatgcgtcca
atgatcgaaaaagggtatgtttatatcgctcgtccacctctatatcaagttcgccaaggt
aaggtagagaaatatctcgataccgacgaagaattgcatgattacttaggtaccttgcaa
ccaagtcctaaaccaattgttcaacgttataagggactaggagaaatggatccagaacaa
ctatgggaaactacaatgaatccagaaaatcgtcggttagatcgagtaagtcctgaatat
gcggaagatgctgacaagatatttgacctcttgatgggtaatgaagtaggtccaagacga
gaatttattgaaaagaacgctaaatacgttgagaatttagatgcttag
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