Lactobacillus johnsonii DPC 6026: LJP_0006
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Entry
LJP_0006 CDS
T01960
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljh03032
]
LJP_0006
03400 DNA repair and recombination proteins [BR:
ljh03400
]
LJP_0006
Enzymes [BR:
ljh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LJP_0006
DNA replication proteins [BR:
ljh03032
]
Prokaryotic type
DNA Topoisomerases
LJP_0006
DNA repair and recombination proteins [BR:
ljh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LJP_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LRS4
Motif
Other DBs
NCBI-ProteinID:
AEB92345
LinkDB
All DBs
Position
6210..8699
Genome browser
AA seq
829 aa
AA seq
DB search
MANENQPQDHRIRNVDLTHTMRTSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMHELG
VTPDKQYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDE
PAAMRYTEAKMSKIAVEMLRDINKETIDWQRNYDDTENEPVVLPARIPNLLVNGASGIAV
GMTTNIPPHNLAEVIRGIHMLMDNPDVTTKDLMKVIPGPDFPTGGIVMGRGGIYRAYETG
KGNIVVRAKTEIETEKNGRERIVVTELPYLVNKAELVKKIADLAREKTIDGITGVRDESD
QTGMRITIDIRRDASASVVLNNLFKETQMQANFGMNMVAIVNGAPHFLTLKQMLEYYLHH
QEDVITRRTKFELKKAEARAHILAGLRIALDHIDEIIKIIRGSQNSDIAKAQLIQNFGLD
DRQSQAILDMRLVRLTGLERDKIEAEYQDLQAKIADYKDILAKPERIDEIIYNELLDIQK
RFGDDRRTKIAEGEAVSIEDEDLIEQKDVLLTLTHNGYIKRMPADEFKVQNRGGRGIKGM
GVQDDDFINHLIFSSTHDFLLFFTNLGKVYSKKAYEIPEFGRNAKGLPIVNLLELDKGEK
IQAVINVPEGADDNYLFFVTKMGTVKRTKVSEFQNIRRSGLIALTLRDGDELNNVLTTDG
KQNILIGTHLGYAVTFNEKDVRSMGRTAAGVRGINLRDNDYVVGSDILEPDSEVLVISEK
GYGKRTAASEYPVKGRGGKGIKTANITEKNGPLAGVTVVNGDEDIMLITSAGVMIRFDVD
DVSQTGRATLGVRLIKVDDGAQVASITAVPKASDEDEESTAEEEPVKEN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaaaatcaacctcaagatcacagaatacgtaatgttgatttaacccatacc
atgcgtacatccttcttagactacgctatgtcagttattgtggctcgtgccttaccagat
gttcgagatggtttaaagcctgtacaacgtcgtattctttacggaatgcatgaattagga
gttacaccagataagcaatataagaagagtgccagaattgttggggaagttatgggtaag
tttcacccgcatggtgactcttcaatctatctagctatggcccacatggctcaagacttt
tcatatcgttacatgctagttgatggacacggaaattttggttctgtcgatggggatgaa
ccagccgcaatgcgttatactgaggcaaaaatgagcaagattgcggttgaaatgcttcgt
gatatcaataaagaaactattgattggcaacgtaactacgatgatacagaaaatgaacca
gtagtattaccagcaagaattcctaacttacttgtcaatggtgccagtggtattgcagtt
ggtatgacaacaaatattccaccacataatttggcagaggtaattcgcggcattcacatg
ttgatggataaccccgatgttactaccaaggatttaatgaaagttattcctggtccagat
tttccaactggtggaattgtgatgggacgcggaggtatttaccgtgcctatgaaaccgga
aaaggaaatatcgttgttcgggcaaagaccgagattgaaactgaaaaaaatggtcgcgag
cgaattgtagttacggaacttccttacttagtaaataaggctgaattagttaaaaagata
gctgatttagcccgtgaaaagacaattgatggtattactggtgtacgggatgaatcagac
cagactggtatgagaattaccattgatattcgccgtgatgcaagtgctagtgtggttttg
aataatttatttaaagaaacccaaatgcaagcaaacttcggaatgaatatggtggccatt
gttaatggtgcaccgcatttcctaactttgaagcaaatgcttgagtactaccttcaccac
caagaagatgttattactcgtagaactaagtttgagttaaagaaggctgaagctagagca
catattttagctggattaagaattgcccttgatcatatcgatgagatcattaagattatt
cgcggttcacaaaatagcgatattgctaaggcacaattaattcaaaactttggcttagac
gatcgtcaatctcaagctattttagatatgagattggttcgtttaacaggcttagagcgc
gataaaattgaagctgaatatcaagatttgcaagcaaaaatagcagattacaaagatatc
ttagctaaaccagaacgaattgatgagattatttacaacgagttacttgatattcaaaag
cgttttggtgatgatcgtcgtactaagattgccgaaggtgaagctgtttcaattgaagat
gaggacttaattgaacaaaaagatgttcttttaactctaactcataatggctacattaag
cgtatgccagcggatgaattcaaggttcaaaaccgcggtggacgcggaataaagggaatg
ggagtgcaagatgatgatttcatcaatcatttaatcttctcaagtacccatgacttttta
ctattcttcactaacttaggtaaggtttactcaaagaaagcctatgaaattccagaattt
ggaagaaatgctaagggcttgccaatagttaatctcttggaacttgataaaggtgaaaaa
attcaagctgtaatcaatgtacccgaaggagcagacgataattatctcttctttgttact
aagatgggaacagttaaaagaacaaaagtcagcgaattccagaatattcgtcgaagtggg
ttaattgccttaactttgcgagacggggatgaactgaataatgttttaactaccgatgga
aaacaaaatattcttatcggtacccatttaggttatgcagttacctttaatgaaaaagat
gttcgttcgatgggaagaacagcggctggtgtccgtggaatcaatttaagagataacgat
tatgtcgttggatctgatattctagaacctgattcagaagtattagtaatttctgaaaaa
ggatatggaaaacgtactgcagcttctgaatacccagttaagggacgcggcggtaaagga
attaagactgcaaacattactgaaaagaacggtcctttagccggtgtaacagtagtgaat
ggcgatgaagatattatgctaattaccagtgcgggagtcatgattcgatttgatgtggac
gatgtttctcaaactggaagagctacattgggtgtacgtttaatcaaggttgacgatggt
gcacaagtagcaagtattactgccgttcctaaagctagtgatgaagacgaagaaagcact
gctgaagaagaaccagtaaaagaaaattaa
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