Lactobacillus johnsonii DPC 6026: LJP_0048
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Entry
LJP_0048 CDS
T01960
Name
(GenBank) putative ABC transporter
KO
K18104
ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:
7.6.2.2
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh01501
beta-Lactam resistance
ljh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LJP_0048
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LJP_0048
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ljh02000
]
LJP_0048
01504 Antimicrobial resistance genes [BR:
ljh01504
]
LJP_0048
Enzymes [BR:
ljh01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
LJP_0048
Transporters [BR:
ljh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LJP_0048
Antimicrobial resistance genes [BR:
ljh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
LJP_0048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_23
DUF6079_1st
ABC_membrane_3
AAA_18
AAA_16
AAA_28
AAA_29
DO-GTPase2
MMR_HSR1
AAA_24
RsgA_GTPase
SRPRB
NB-ARC
AAA_14
cobW
AAA_30
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AEB92387
LinkDB
All DBs
Position
60368..62077
Genome browser
AA seq
569 aa
AA seq
DB search
MKRDRIYLFKIDVLLLIAILLSVAGSVCNLILPLFVRQFIDVRATSLMSFDSLLPILTVL
MMGSIVNAVSMYLISVSGDRRIRDIRENIEEKLLKLPISFYKENASGELVSRIINDSLII
KEFTTNEVPNAIVSIITLIGSIGILLYLDLKLTLVIVLSFTIVAIIAYPLGKINEGYSFL
IQDYLSKLSQVITENIQNIQIIKLYNAQKEVKHKFKKINNNIYGLSKKIDKIFSITGPIQ
TMFTLLAFLIIVLYGSTRVSQHTLSMGILASFMMYIFEIITPINTLANFYVSYSEAKGAS
KVISRIMNTTEEKVTGKDINGIKEPYIEMKNISFKYGKKSSLVLKCVSVSFDSLKKIAIV
GPSGAGKTTLISILTRLQEKYDGLVFLNGRNSKDYSLASWRSLFSVVTQENSIFSGSIRD
NLTFGLIDKPSEEELNQALKVASMSKDIDKFPGKLDFDVGENGGKLSGGQRQKIQIARAY
LRDTPFIIFDEATSNLDPESESEILSSIDELSSKKTLIVIAHRLSTIVNADKIYFLDNHQ
ILGAGTHEELLRKVEKYKTFVNDQFISKE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagggatagaatttatttatttaaaatagatgttttattgttaattgcaattcta
ttaagcgttgcgggaagtgtatgcaatttgattttaccacttttcgttagacaatttatt
gatgttagagctacaagtctaatgtcatttgattctctgctaccaattcttactgtatta
atgatgggatcaattgtaaatgcagtaagtatgtatctaattagtgtgtctggtgacaga
agaataagagatattcgtgaaaatatagaagaaaaattgcttaaattgcccatctctttt
tataaagaaaatgcaagcggagaattagtaagtcggattataaacgattcattaattata
aaagaatttactactaatgaagttccaaatgcaatagttagtatcattacgcttattgga
agtataggtattctattatatttggatttaaagttaacattagtaattgttctttctttt
actatagtagcgattattgcttatcctttaggaaaaataaatgaaggttattcattcttg
attcaggactatctgagtaaattatcgcaggtaataactgaaaatattcaaaatattcaa
attatcaagctatataatgctcaaaaagaagtaaaacataagtttaaaaagataaataat
aacatttatggattatcaaaaaaaatagataaaatttttagcataactggcccaattcag
acaatgtttacacttttggctttcttaataattgtactttatggaagtactagagtatca
caacatacgctttcaatgggaattttagcatcatttatgatgtacatatttgaaattatt
actccaataaatacgttagccaatttttatgttagttattccgaagctaaaggtgcatct
aaggtaattagccgaataatgaatactacagaggaaaaagtaactggaaaagacatcaat
ggcataaaagaaccatatatagagatgaaaaatatttcatttaaatatgggaagaagagc
tcactggtattaaaatgtgtatcggtatcttttgattcattaaaaaagattgctatcgtt
ggaccttcaggagctggaaaaacgacgctaattagtattttaactagactccaagaaaaa
tatgatggactggtatttttaaatggaagaaatagtaaagattattccttagctagttgg
cgtagtttgtttagtgtagttactcaagaaaatagtatattttcaggaagtataagagat
aatttaacttttggattaatcgataagccaagtgaagaagaattaaatcaagcgctgaaa
gttgcttctatgagtaaagacatagataagtttcctggaaaattagattttgacgtaggt
gaaaacggtggaaagttatcaggtggtcaacgacaaaaaattcaaattgctagagcatat
ttgagagatacaccgtttattatttttgatgaagctacatcaaatttagatcctgaatct
gaatcggaaattttaagttcaatagatgaattatcatcaaaaaagacattaatagtaata
gctcataggctctctacaattgtaaatgcagataagatttattttcttgataatcatcaa
atcttaggagcagggacgcatgaagagcttctaagaaaagttgaaaaatataaaacgttt
gtgaatgatcagtttatatctaaagagtaa
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