Lactobacillus johnsonii DPC 6026: LJP_0209
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Entry
LJP_0209 CDS
T01960
Name
(GenBank) putative primase
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ljh03009
]
LJP_0209
Enzymes [BR:
ljh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
LJP_0209
Ribosome biogenesis [BR:
ljh03009
]
Prokaryotic type
rRNA processing factors
LJP_0209
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
MJ0874
ZnuA
Beta-Casp
Motif
Other DBs
NCBI-ProteinID:
AEB92548
LinkDB
All DBs
Position
242810..243373
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AA seq
187 aa
AA seq
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MESENKKQFNAVIVVEGRDDTKRLKQFFPGIETIETNGSEVSEQTLAEIKKLSQTREIII
FTDPDYNGERIRRLVTQAAPQAKQAFITRKEGEPTKRGNSLGVEHASKEALIRALSDLHE
VKPIESDITKEKYDELGLGMSSGARLLREKVGIKLGIGYGNSKQFYKRLKMFGITYDELK
RAVEDVK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagaaaataaaaaacaatttaatgctgtaatagttgttgaaggtcgagatgat
accaaacgtctaaaacaattttttcctggaattgaaactattgaaaccaatggttcagag
gtatctgaacaaactttagctgaaataaagaaactttcgcaaactagagaaataattatt
tttactgacccagattataatggcgaaaggattcgacgtttagttacccaagcagctcct
caggctaagcaagcttttattacacgcaaagaaggagaaccaactaagcgtggaaatagt
ttaggagttgaacacgcttcaaaagaagctttgattcgtgctttaagtgatttgcatgaa
gttaaaccgatagaaagtgatatcactaaggaaaagtacgatgagttaggcttaggaatg
agctcgggtgctcgtcttttacgtgagaaggttgggattaagctaggaattggatatgga
aatagtaaacaattttataaacgcttaaagatgtttggaattacttatgatgaattaaag
agggcagttgaagatgtcaaatag
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