Lactobacillus johnsonii DPC 6026: LJP_0448
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Entry
LJP_0448 CDS
T01960
Name
(GenBank) 60 kDa chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LJP_0448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljh03019
]
LJP_0448
03110 Chaperones and folding catalysts [BR:
ljh03110
]
LJP_0448
03029 Mitochondrial biogenesis [BR:
ljh03029
]
LJP_0448
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ljh04147
]
LJP_0448
Enzymes [BR:
ljh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LJP_0448
Messenger RNA biogenesis [BR:
ljh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LJP_0448
Chaperones and folding catalysts [BR:
ljh03110
]
Heat shock proteins
HSP60 / Chaperonin
LJP_0448
Mitochondrial biogenesis [BR:
ljh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LJP_0448
Exosome [BR:
ljh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LJP_0448
Exosomal proteins of other body fluids (saliva and urine)
LJP_0448
Exosomal proteins of breast cancer cells
LJP_0448
Exosomal proteins of colorectal cancer cells
LJP_0448
Exosomal proteins of bladder cancer cells
LJP_0448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEB92782
LinkDB
All DBs
Position
490210..491841
Genome browser
AA seq
543 aa
AA seq
DB search
MAKEIKFSENARHSLLKGVDKLADTVKTTLGPKGRNVVLEKSYGAPDITNDGVTIAKSIE
LENHFENMGAKLVSEAAQKTNDIAGDGTTTATVLTQAIVREGMKNVTAGANPVGIRRGIE
TATKAAVDELHKISHKVSTKDEIAQVASVSSASTEVGNLIADAMEKVGHDGVITIEESKG
IDTELSVVEGMQFDRGYLSQYMVTDNDKMEADLDNPYILITDKKISNIQDILPLLQEIVQ
QGKSLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVIS
SDLGLELKDTKIDQLGKAGKVTVTKDSTTIVEGAGSKEAIAERVDQIKKQIADTTSDFDR
EKLQERLAKLAGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALVDV
MKSIQGTVKGDSEDAETGVKIVMKALGAPVRQIAENAGKDGAVILDHLEHEDPEVGYNAA
TNKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAVVADAPEDDKNQAPAAPNPGMG
MGM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagagattaaattttctgaaaatgcaagacactcattattaaaaggtgttgat
aaattagcagatactgttaagacaactttaggacctaagggtagaaatgttgttttggaa
aagagttatggtgctcctgacattactaacgatggtgttactatcgccaagagtattgaa
ttagaaaaccattttgaaaacatgggtgcaaagcttgtttctgaagctgcacaaaagact
aacgacattgctggtgacggtactactactgctactgttttaactcaagcaatcgttcgt
gaaggtatgaagaacgttactgctggtgcaaaccctgttggtattcgtcgcggtattgaa
actgctactaaggcagctgttgacgaattacacaagattagccacaaggtaagtactaag
gacgaaattgctcaagttgcttcggtttcatcagcttcaactgaagttggtaacttaatc
gctgacgcaatggaaaaagttggtcacgatggtgttattactattgaagaatcaaagggt
attgatactgaactttcagtagttgaaggtatgcaattcgatcgtggttacttatcacaa
tacatggtaactgacaacgacaagatggaagcagacttggacaacccttacattttgatt
actgacaagaagatttctaacattcaagatatcttgccattattacaagaaattgttcaa
caaggtaagagtttattaatcattgctgatgatgttgatggtgaagctcttccaactctt
gttttgaacaagatccgtggtactttcaacgttgttgctgttaaggctcctggctttggt
gaccgtcgtaaggcaatgcttgaagatatcgctatcttaactggtggtactgtaatttct
tcagacttaggtcttgaattaaaggacactaagattgatcaattaggtaaggctggcaag
gttactgtaaccaaggattcaactactattgttgaaggtgctggttctaaggaagctatt
gcagaacgtgtagatcaaatcaagaagcaaattgctgacactacttcagactttgaccgt
gaaaagttacaagaacgtcttgctaagcttgctggtggtgttgctgtcatcaaagttggt
gctgctactgaaactgaattaaaggaaagaaagtacagaatcgaagacgctttgaacgca
acccgtgccgctgttgaagaaggttacgttgctggtggtggtactgcattagttgatgtt
atgaagtccatccaaggtactgttaagggtgacagcgaagatgcagaaactggtgttaag
attgttatgaaagctttaggcgctcctgtacgtcaaattgctgaaaacgctggtaaagat
ggtgctgttatcttagaccacttagaacatgaagacccagaagttggttacaatgctgca
actaacaagtgggaaaacatggttaaggctggtattatcgacccaactaaggtaactcgt
tcagcacttcaaaatgctgcttcaattgctgccttgttattaactactgaagctgttgtt
gctgacgctccagaagatgacaagaaccaagctcctgcagctccaaacccaggtatgggt
atgggaatgtaa
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