Lactobacillus johnsonii DPC 6026: LJP_0581
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Entry
LJP_0581 CDS
T01960
Name
(GenBank) lactacin F ABC transporter permease component
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh02010
ABC transporters
ljh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LJP_0581
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LJP_0581
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ljh01002
]
LJP_0581
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ljh02000
]
LJP_0581
Peptidases and inhibitors [BR:
ljh01002
]
Cysteine peptidases
Family C39
LJP_0581
Transporters [BR:
ljh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LJP_0581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_29
DUF87
Guanylate_cyc_2
AAA_22
ATP_bind_1
AAA_30
ABC_ATPase
RsgA_GTPase
NTPase_1
AAA_16
AAA_15
MobB
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AEB92913
LinkDB
All DBs
Position
644524..646683
Genome browser
AA seq
719 aa
AA seq
DB search
MLFKYKSVYVPQVDEMDCGVACLAMILKQYHSRVSLAHLRHEARTNLEGTTALGLVKTAQ
KFNFKTEAVKADMSLFNEDSIQYPFIVHVLKQGELLHYYVVLKNTKHYLVIADPDPSVGI
IKMPKDKFAQEWTGIALFMVPNEDFEPIKEKKNNLWSLFPYMFKQKRLMINIILAALLMT
IISICSSYFVQGIIDTYIPDGTYQTLSILAVGLLIAYIFNSIFSYGQNFLLNVLGQRLSI
DLNLQYIRHIFELPMEFFVTRRTGEITSRFSDASRIIDALASTVISLFLDLAIVIVMGIV
LAAQNMTLFGITLLALPVYAVVILGFTKKFEKLNDEQMESNAVLSSSVIEDIQGIETIKA
LNSEDTRYRRIDSQFVNYLKKSFKYSKAESLQTALKTFIQLSLNVIILWVGARVVIQGQM
SIGQLMTFNALLSYFIDPLQNIINLQPRLQSASVAQNRLNEVYQVQSEFNADTSIQNSAA
LEGMIEYKHVHYRYGYGTDVLKNINLKIKPDEKLAIVGMSGSGKSTMVKLLVDFFSPSKG
EVTLNGHATSEVNKHTLRSYVNYVPQTPYIFSGTVKENLLLGCRPDISEEDVIKACQIAG
IDQEIASLPLQFETKLDENAKILSGGQKQRLTIARALLSPAKVFIFDEVTSGLDTITEKR
VVDNLMKLKDKTIIFIAHRLAIAERADKVVVIDQGQIVEEGSHEELMEQHGFYYDLVKG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttattcaaatataaatctgtttatgtacctcaagtagatgaaatggattgcggagtt
gcttgtctagcaatgattttaaagcagtatcattctcgtgtatctttagcacatttgcgt
catgaagctcgcacaaatcttgaaggtacaactgcgctgggactagttaaaacagcacag
aaatttaattttaaaactgaagccgtaaaagctgatatgtctctttttaatgaggatagt
attcaatacccttttattgtgcatgttcttaagcaaggagaattacttcattattacgta
gttcttaaaaatactaagcattacttagtaattgccgacccagatccatcagttggcata
ataaagatgcctaaagataaatttgctcaagaatggactggtattgcgctttttatggtt
ccgaatgaagattttgaaccaattaaagaaaagaaaaataacctatggtctctctttcca
tatatgtttaagcaaaagcggctgatgattaatatcattttagccgctttattaatgaca
ataattagtatttgtagttcatactttgtgcaaggaataatcgatacttatattcccgat
ggaacttatcagactctttcaattttagctgttggactattaattgcttatatttttaat
tcaatcttttcttatggacagaattttttattaaatgttctaggtcaaagattaagtatt
gatttaaacctccaatatataaggcatatttttgaattgccaatggaattctttgtgact
agaagaactggtgaaataacctcacgtttctctgatgcaagtagaattattgatgctcta
gcaagtactgttatttcacttttcttagacttagcgattgtaattgtaatgggaatagtg
ttagctgctcaaaatatgactttatttggaatcacattattagctttaccagtatatgct
gtagtaattctgggatttactaagaaatttgaaaagttaaatgatgaacaaatggagagc
aatgcagtactaagttcttcagtcatcgaagatattcaaggtattgaaactatcaaagct
ctcaatagtgaagatacaagatatcgtagaatcgatagccaatttgtaaattatttaaag
aagtcatttaaatatagtaaggctgagagtttgcagacggcgttaaagacatttattcaa
ctatctcttaatgtaattattttatgggttggcgcacgagtagtgatacaaggacagatg
agtatcggtcaattaatgacttttaatgcattactatcttatttcattgacccacttcaa
aatattattaacttacaacctcgtcttcaatcagctagtgttgcacaaaatagattgaac
gaggtttatcaggtgcaaagtgaatttaatgcagatacttctatccagaactcagctgct
ttagaaggaatgattgaatacaagcatgttcattatcgatatggttatgggacggatgtt
ttaaaaaacattaatctaaaaattaagccagatgaaaaattagcaattgttggcatgagt
ggatcaggaaaatcgacaatggttaagttactcgttgatttcttttcaccaagtaaggga
gaagtaactttaaatggtcatgcaactagtgaagttaataaacataccttacgctcatat
gttaactatgttcctcaaacgccatatatcttttctggaacagttaaggagaatttatta
ctcggctgcagaccggatattagcgaagaagatgtaattaaagcctgtcagattgctgga
attgatcaggagatagctagtttgccactacaattcgagacaaagttagatgagaatgcc
aagattttatccggtggacaaaagcagagattaactattgctagagcattactctcgcca
gcaaaagtttttatctttgatgaagtaacaagtggcttagatacaattacagaaaaaaga
gtagttgacaatcttatgaaactaaaagacaagacaatcatttttattgcacaccgtcta
gccattgcggaacgtgcggataaagtagttgtaattgatcaggggcaaattgttgaagaa
ggaagtcatgaagagcttatggagcaacatggtttttattatgacttagtaaagggatag
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