Lactobacillus johnsonii DPC 6026: LJP_0672
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Entry
LJP_0672 CDS
T01960
Name
(GenBank) exonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LJP_0672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljh03400
]
LJP_0672
Enzymes [BR:
ljh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LJP_0672
DNA repair and recombination proteins [BR:
ljh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LJP_0672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
PUMA_CC
KxDL
Sec10_N
DUF7018
Retrotran_gag_2
MTR4-like_stalk
Acetyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AEB93003
LinkDB
All DBs
Position
736576..736821
Genome browser
AA seq
81 aa
AA seq
DB search
MAIKKNNFEEQLNELQEIVNKLESGNVPLEDALSEFQAGVKLSRELEKKLNDAEQTVAKL
VDKDGNEKALDPQNASAPEEE
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaagaaaaataattttgaagaacagttaaatgaattacaagaaatagttaat
aagcttgaaagtggtaatgttcctcttgaagatgctttaagtgaatttcaagcaggagtt
aaattaagccgagaattagagaaaaagctaaatgatgcagaacaaactgtggccaagtta
gtagataaagatgggaacgaaaaggctttagatccccaaaatgcgtctgctcctgaggaa
gaataa
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