Lactobacillus johnsonii DPC 6026: LJP_0699
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Entry
LJP_0699 CDS
T01960
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LJP_0699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljh03019
]
LJP_0699
03009 Ribosome biogenesis [BR:
ljh03009
]
LJP_0699
03036 Chromosome and associated proteins [BR:
ljh03036
]
LJP_0699
Enzymes [BR:
ljh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LJP_0699
Messenger RNA biogenesis [BR:
ljh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LJP_0699
Ribosome biogenesis [BR:
ljh03009
]
Eukaryotic type
90S particles
RNase
LJP_0699
Prokaryotic type
rRNA processing factors
LJP_0699
Chromosome and associated proteins [BR:
ljh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LJP_0699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AEB93030
LinkDB
All DBs
Position
765120..765800
Genome browser
AA seq
226 aa
AA seq
DB search
MVSVAFKQNLKKKYGIKFNNEKLLEDAFTHSSYANEHPGRKDYEKLEFLGDAVLELAVSD
YLYRHFPRLNEGELTRMRSNIVRTEGFSEFAIECGFPEEINLGKGEEKAGARKRKTLLED
VFEAFNGALFLDQGMPAVQHFLHLTVYPLIAEGDFNASRDYKTELQERLQVNGPVKIEYQ
VISEDESKPSFKVQLLVNGEKVSEGQGRNKKAAEQQAAQAALDKNK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggtttcagtagcttttaaacaaaatttaaagaaaaaatacggaataaaatttaataac
gaaaaattgcttgaagatgcatttacacattcttcttacgctaatgagcatcccggaaga
aaagactatgaaaaattagagtttcttggtgatgctgttcttgaattagcggtatctgat
tatctatatcgtcatttccccagattaaatgaaggggagttaacaagaatgcgatctaac
attgttagaacagaaggattttctgaatttgccattgaatgtggatttccagaagaaatt
aatttgggtaaaggagaagaaaaagctggcgctaggaaacggaagacacttcttgaagat
gtgtttgaagctttcaatggtgcacttttcttagatcaaggaatgccagcagtacagcac
ttcttacatttgaccgtttatccattaattgctgaaggagattttaatgcctcacgtgat
tataaaactgaacttcaggaacgtttgcaggtaaatggaccagttaagattgaatatcaa
gtaatatctgaagatgaatcaaagccatcttttaaagttcagctacttgtaaatggtgaa
aaagtttcagagggacaaggacgtaataaaaaagctgctgagcagcaagcggctcaagct
gcattagataaaaataaataa
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