Lactobacillus johnsonii DPC 6026: LJP_0720
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Entry
LJP_0720 CDS
T01960
Name
(GenBank) ABC transporter ATPase and permease components
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LJP_0720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ljh02000
]
LJP_0720
Transporters [BR:
ljh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LJP_0720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
MobB
NB-ARC
AAA_22
AAA_21
TsaE
Zeta_toxin
KAP_NTPase
nSTAND3
RsgA_GTPase
AAA_18
cobW
AAA_16
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AEB93048
LinkDB
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Position
784973..786739
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AA seq
588 aa
AA seq
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MNIFSKLGWFFKQEKKRYIIGISFLALTSIANLVPPRILGLMADQLDKGSISWGEYGALI
LSVTAAAIVLYLLRYFWRKQIWGGAAELERQMRSRLFKHFMIMDKTFYQRHRTGDLMAHA
TNDINSIQNVAGDGVLTLVDSLVTGGTTMIAMIIFTDFRLTIITLLPLPFLALGAWKLGD
KLHYSFDKSQAAFSRLNNKTQESVSGIKVLKAFGESEQDSAAFNKMVDDTIQINKKVFKW
DSMFDPLGTLIIGATYVITIIYGGLLVSNHTLSVGQLVSFIAYISNMVWPMFAIGYLFNI
LERGSASYDRVERLLYEKPQITDENADQSLTVTDIQGDLKYEIKFFAYPDEKEIPVLQNI
DFTLKPGQTLGLVGKVGSGKTTIIELLLREFDQYQGRISLGGHDIRNIPLKLLLSEISYV
PQNNFLFSTSIEKNIAFSDENVEKDKIESAAQKSDLHDDILQMPAGYKTLVGENGVSLSG
GQKQRLSIARALLKESPILILDDALSAVDAKTETSILESLKSERKEKKTLIAAHRLTSVM
DADLILVLKEGRIVERGKHADLLAQNGWYAEMWRKQELQAKVGEVDGQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttagcaaattaggatggttttttaagcaagagaagaaaagatatattatt
ggtattagttttttagctttaacttcaattgccaatttagtcccacctagaattttggga
ctgatggctgaccagctagataaaggatcaattagctggggtgagtacggtgcattgatt
ctatctgttactgctgcagcaatagtcttatatttattgcgttatttttggcgtaagcaa
atttggggtggagcagcagagctagaaagacaaatgcgatcccgcttattcaagcatttt
atgataatggataagaccttttatcaaaggcatcgcactggggatttaatggcacatgcg
actaatgatattaattccattcaaaatgtagctggagatggagttttgactttagttgac
tctttggttactggtggaactacaatgattgcgatgattatttttaccgattttagatta
acaattattacccttttaccacttccttttcttgctttaggtgcttggaagttgggagat
aagcttcactatagttttgacaaatcacaagctgcattttcacgtttaaataataaaaca
caagaatcagtttccgggattaaagtattaaaagcttttggtgaaagtgagcaggattcg
gctgcctttaataagatggtagatgatactattcaaatcaataagaaagtttttaaatgg
gattcaatgtttgatccattagggacattgattattggagcaacttatgtaattacgatt
atctatggtggattattggtatcaaatcatactttatcagttggtcaattggtttctttt
attgcctatatttctaatatggtatggccgatgtttgcaataggttatttatttaatatt
ttggagcgtggatcagcctcctatgatcgtgttgaacgtctgttatatgagaaacctcaa
attactgatgaaaacgctgatcaaagcttaacagttacagatattcaaggcgatttaaaa
tatgaaattaaattctttgcctatcctgatgaaaaagaaataccagttttgcaaaatatt
gatttcaccttaaaaccagggcaaacattaggtttagtagggaaagttgggtccggaaag
actaccattattgagcttttactaagagagtttgatcaataccaaggaagaataagctta
ggtggtcatgatattagaaatattcctttaaaattacttttaagtgaaatttcgtacgtt
ccacaaaataatttcttgttttctacttctattgaaaaaaatattgctttttctgatgaa
aatgtagagaaagataaaattgaatctgcagctcaaaagagtgatttacacgacgatatt
ttacaaatgccagctggatataaaacattggtgggtgagaatggagtatctttgtctggg
ggacaaaaacaaagattgtcaattgcgcgagccttgttaaaagaaagtcctattttgata
ttagatgatgctctttcagcagtagatgcaaaaacagagacctctattttggagtccctt
aaatcggaaagaaaagagaagaaaactttaattgcggcccatcgtttgacctcagtaatg
gatgctgatcttatcttagttctaaaagagggtaggattgttgaaagaggaaaacatgct
gaccttttagctcaaaatggctggtatgctgaaatgtggcgtaaacaagaattacaagca
aaggtgggtgaagtagatggacaataa
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