Lactobacillus johnsonii DPC 6026: LJP_0739
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Entry
LJP_0739 CDS
T01960
Name
(GenBank) N utilization substance protein A-like protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
ljh
Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljh03021
]
LJP_0739
03009 Ribosome biogenesis [BR:
ljh03009
]
LJP_0739
Transcription machinery [BR:
ljh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LJP_0739
Ribosome biogenesis [BR:
ljh03009
]
Prokaryotic type
rRNA transcription factors
LJP_0739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_1
KH_NusA_C
S1_2
Phytoreo_P8
Motif
Other DBs
NCBI-ProteinID:
AEB93067
LinkDB
All DBs
Position
809487..810707
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AA seq
406 aa
AA seq
DB search
MSKEMVEAFATLEKEKGIKQEVIVDAIKAALVAAYKKNYNQAQNVEVVFDEKKGNFKVNA
IKTVVDEVQDSRLEVSLKDALEINRAYEVGDEIRFEVTPKDFGRLAAQTAKQVIMQRLRE
AEREHIISEYSQYKDEIVTGTVERRDNRFVYVKIGNVEAVMPHNDQLPGETYNPQDKVRV
LVTRVGSDSKGAQITVSRTAPDLVKRLFEQEVPEVYDGTVEIVSIAREAGDRTKIAVKSN
DSDIDPVGTLVGPKGARVQNIVNELGGENIDVVKYEDNPSDFIANALNPAEVIAVQFSGD
EDDKNALVIVPDYQLSLAIGKRGQNVRLAARLTGYKIDIKPESQVEFVDSEGDDVEADQE
TTNDNVSNEETPESIAEQIEDDPSDKFPNGEDVNSALNDDADKDEE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagaaatggtggaagcctttgcaaccttagaaaaagaaaaaggcattaaacaa
gaagttattgttgatgcaattaaggctgctttagtagctgcatataagaaaaattataac
caagctcaaaatgtagaagttgtttttgatgaaaagaaaggcaacttcaaagttaatgca
attaagactgtagttgatgaagttcaagatagtcgtctcgaagtaagtttgaaagatgct
cttgaaattaaccgtgcttacgaagttggtgacgaaattcgttttgaagtaactcctaaa
gacttcggacgtttagctgctcaaactgctaagcaagttattatgcaacgtttacgcgaa
gctgaaagagaacatattattagcgagtactctcaatataaagatgaaattgttactggt
acagttgaaagacgtgacaatcgcttcgtttatgtgaagattggaaatgtagaggctgta
atgccgcataatgatcaactaccaggtgaaacttacaatcctcaagataaagttcgtgtc
ttggttactagagtagggtctgattcaaagggagcacaaattacagtttctagaacagca
cctgatttagtaaaacgtctttttgaacaagaagtaccagaagtttacgatggaactgtt
gagattgtatccattgctcgtgaagcaggcgatagaaccaagattgcagttaagagtaat
gattctgatattgatccagtcggtaccttagtaggaccaaagggagctcgtgttcaaaac
atcgttaatgaattgggtggagaaaatattgatgttgtaaaatatgaagataatccatct
gattttattgccaatgctttgaatccagcagaagtaattgcagttcaatttagcggggat
gaagatgataagaatgctttggtaattgtacctgattaccaattgtcattggccattggt
aaacgtggtcaaaatgtacgccttgctgctcgcttaactggctataagattgacattaaa
cctgaatcacaagttgaatttgttgattctgaaggtgatgatgttgaagcagatcaagag
actacaaatgataatgtctcaaatgaagaaacaccagaatctattgctgaacaaattgaa
gacgatccaagcgataagtttccaaatggagaagacgttaattcagcattaaatgatgat
gcagataaagatgaggaatag
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