Lactobacillus johnsonii DPC 6026: LJP_0744
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Entry
LJP_0744 CDS
T01960
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ljh03016
]
LJP_0744
Enzymes [BR:
ljh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LJP_0744
Transfer RNA biogenesis [BR:
ljh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LJP_0744
Prokaryotic type
LJP_0744
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEB93072
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All DBs
Position
814423..815316
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AA seq
297 aa
AA seq
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MLNGIVVVNKPRGVTSSDCVYKLRKILQIRKIGHAGTLDPEVNGVLPIAIGQATKLIELM
HEKPKSYIGSGMFGRATDSYDLDGTTTAEEKIVTPFTSDEIISGMKKLTGKIDQVPPIYS
AVRVNGKRLYEYARENIPVERPKRKVNIYSYELTQDPEYDPLEKTESFNFAIRCSKGTYV
RSLVNDLGEELRVPAVMTSLTRTSSSGFDLSQAVDLETIEKEIDYPEKWLQPIDSFFVDL
PQLQISPDQFKRVSNGAGIKLNTTYAKVALVYNGHIKAIYQRQGKIYRPEMMLLKNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatggaattgtagtagtaaataagccacgcggagtaaccagtagtgactgtgtt
tataaattacgaaaaattttacaaattagaaaaattggacatgcaggtacgttggatcca
gaagtaaatggggtattaccgattgcaattggccaagccacaaagctaattgaattgatg
catgaaaaaccaaagtcatatattggaagtggaatgtttgggagagcaactgatagctat
gatttagatggaacaaccactgcagaagaaaagatagttactccatttacaagtgatgaa
attattagtggaatgaaaaaacttactggaaagattgatcaagttcctccaatatattct
gcggtccgtgttaatggtaaaagactttatgaatatgctcgagaaaatattccagtagaa
cgtccgaaaagaaaagtaaacatttatagttatgaattaactcaagatccagaatatgat
ccactagaaaaaactgaaagttttaattttgctattcgctgttctaaaggaacctatgta
cgatccctagtaaatgatttgggagaggaattgagagttccagctgtaatgaccagtctt
actagaactagcagttcaggttttgatttaagtcaagcggtagatttagaaactattgaa
aaagaaatagattatcctgaaaaatggcttcaaccaattgatagttttttcgtagattta
ccccaacttcaaatatcaccagatcagtttaaaagagtttcaaatggagcaggcattaaa
ttgaacaccacttatgctaaggtggctttggtttataatggacatataaaagctatttat
caacgacaaggtaaaatttatcgtcctgaaatgatgcttttaaaaaatgaatag
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