KEGG   Lactobacillus johnsonii DPC 6026: LJP_0960
Entry
LJP_0960          CDS       T01960                                 
Name
(GenBank) ATP dependent helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
ljh  Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:ljh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ljh03400]
    LJP_0960
Enzymes [BR:ljh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     LJP_0960
DNA repair and recombination proteins [BR:ljh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LJP_0960
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII DEDDh_C SNF2-rel_dom DEAD_2
Other DBs
NCBI-ProteinID: AEB93286
LinkDB
Position
1029631..1032447
AA seq 938 aa
MKKAFTDDVFAVVDLETTGTQRNQGDHIIQFGCAIIKKRKVVKTYSFLINPHREIPQAVE
NLTHISNEDVAQAHDFSYYAPKIRKILENTIFVAHNVNFDLPFLNYELVNAGLEPLTGKA
VDTVELAQIAFPTFPSYKLRDLTARLRIKHLNPHRADSDALVTAKLLLKAIKKLENLPQA
TLNTLTSLSKGLLRDTDYIFYEIGQVARQTKRPLPKDLVQVKHLILKKQNIAPRRNDVAS
PGSFPQSDDEKKELFKKNLRFRRGQVSLINRLHDFVYSDSDNSLVVEAPNGSGKTFSYLM
AYAYELYSGRKLVVATPTKVLQEQILKQEIPQLLRVTHLDLDAQIVKSSSHYLDLDGFYN
SLYQTDNPIQQTLILQMGILIWLTETETGDLDELQLTNYQAPLFAAIEHPGDARIGTAFA
EYDFWNLARSRQEQADILITNHAYLANHYMDSIWGQNPFLVVDEAHRFVENVASSRNDSL
QFESFWGMCSHLRNLLFYAEDSAKARFGNNLEFKLILDKLEKDTNNLIHSINKIQQALYD
NRKFATSWEEKRQNAISLGFQGQDLFNNIGHFKHLLNLMQDNIEIVRQETNQLLFLLYHQ
QKNLLTSDDVLIRDLQEEIDQLDYYSEQNYLLLDQLSDPKKLDHEGFVLEISNEDDPLST
NLTWLTLDPEEEVKQLYHYFDKKLFISATLAEQDDFSYTIKNLYLDPKKTLTYRAKPSFK
VEKHLKVYALSDNNAPEDPNSPEYETFISNLLTQIKDYKHVLVLFTNLDVIRDVFSRLSE
NSNALKDYEILAQGLTGSNEKIAKRFGIAEKAILLGANSFWEGIDFKHNGVDLAIVTRLP
FESPDQPEVKLRTECLKKQVGADKIFEVDTLPRAILRFRQGCGRLIRNERDHGVFVVLDQ
RVWNKSYGEQFLSGLPVSAKKVSKQQLLNVLRNSKQNE
NT seq 2817 nt   +upstreamnt  +downstreamnt
atgaaaaaagcctttacagatgatgttttcgcggtcgtcgatcttgaaactacgggcacc
cagcgcaatcaaggcgatcatattattcaatttggttgtgcaatcatcaaaaagcgtaag
gtagtaaaaacatattcattcttaatcaatcctcatcgtgaaatccctcaagctgttgaa
aacttaactcatattagtaatgaagacgtggcgcaggctcatgattttagctactatgca
ccaaagatacgaaaaatcttagaaaatacgatttttgttgcccataatgtaaactttgat
cttccgtttttaaactatgagcttgtaaatgcgggcttagagccactaactggaaaagca
gttgatacggtggaattagcacaaattgcttttccaacttttccatcttataaattacga
gatttaacagctcgcttgagaattaaacacttaaacccgcaccgagctgattcagatgca
ctagtaacggcaaaattactactaaaagcaattaagaaactggaaaatcttcctcaggca
actctcaatactttgacttccttatcaaaaggattgctacgagatactgactatattttt
tatgaaattggtcaagttgctcggcagactaagagaccgttgcctaaagatttggttcag
gtaaaacatttaatattgaaaaagcaaaatatagctccacgtcgtaatgatgtagcaagt
cctggatcatttcctcaaagcgatgatgaaaagaaagaattatttaaaaagaatctccgc
tttagacggggacaagttagtctaattaatagactccacgactttgtttatagtgactca
gataactcactagttgttgaagcaccaaatggtagcggaaaaacgtttagttacttaatg
gcttatgcatatgagctatattctgggagaaaattagtcgtagcaacgcccactaaggtt
ttacaggaacaaattctaaagcaggaaattccgcaacttttacgggttactcatttagac
ttagatgcccaaattgttaaatcaagcagtcattatttagatttagatggattttacaat
tctctttatcagactgataatccgattcagcaaactttaattttacaaatggggattttg
atctggcttactgaaacagaaactggtgatttagatgaactccagttaactaactatcag
gcacctctctttgcagcaattgaacatcctggagatgcgagaattggaacagcttttgca
gaatatgatttctggaatttagcacgtagtagacaagaacaagccgatatcttaattact
aatcatgcctatttagctaatcactatatggactcaatttggggccagaatccgttccta
gttgttgatgaggcgcatcgttttgttgaaaatgtagcaagttcaagaaatgattcactt
caatttgaaagcttctgggggatgtgtagtcacttacgtaacttacttttttatgcagaa
gatagtgctaaggcacgttttggtaataatttagaattcaaattgatcttagataaactt
gaaaaagatacaaataatttaattcattctattaacaagatccagcaagccctttatgat
aatcgaaaatttgctaccagttgggaagagaagagacaaaatgctattagtctcggattt
cagggacaggatttgttcaacaatattgggcacttcaagcatttgttaaatcttatgcaa
gataatattgaaattgtgcgccaagagactaatcaactcctctttttgctatatcatcaa
caaaagaatcttttaacgagcgatgatgttttaataagagatcttcaagaagaaatagat
cagttagattattactcagagcaaaactatcttttacttgatcaattaagtgaccctaaa
aagttagatcatgaaggatttgttttagaaataagtaatgaagatgacccactatctact
aatttaacttggttaacacttgatcctgaagaagaagttaaacagttatatcattacttt
gataaaaaattatttatttctgctactttagcagaacaagacgacttctcatacactatc
aaaaacctatatttagatcctaaaaaaacccttacttatcgagcaaagccttctttcaaa
gttgaaaagcatttaaaagtatatgcactttccgataataatgctccggaggatccaaac
agtcctgaatatgaaacatttattagtaatttacttactcaaattaaagactataagcat
gtgttagttttatttactaatttagatgttatccgggatgtttttagcagattaagtgaa
aacagtaatgctttaaaggactatgaaattttggctcaaggcttaactggttctaatgaa
aaaattgctaaacgtttcggaattgctgaaaaagccattttacttggagcaaatagtttc
tgggaaggaattgattttaaacataatggggtagatcttgcaattgttacgcgtttacct
tttgagtcacccgatcaacccgaggtaaaattacgaacagaatgtttaaaaaagcaagtt
ggagctgataaaatttttgaagtggatacacttccacgagcaattttaagatttaggcag
ggatgcggtcgtttgatcagaaatgagcgtgatcatggagtctttgtagttttagatcaa
cgagtttggaataaatcttatggcgaacagtttttatcaggactacctgtgagtgctaaa
aaggttagcaagcaacaactactaaatgttttaaggaatagtaaacagaatgaatag

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