Lactobacillus johnsonii DPC 6026: LJP_1044c
Help
Entry
LJP_1044c CDS
T01960
Name
(GenBank) ABC transporter ATPase component
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LJP_1044c
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ljh02000
]
LJP_1044c
01504 Antimicrobial resistance genes [BR:
ljh01504
]
LJP_1044c
Transporters [BR:
ljh02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LJP_1044c
Antimicrobial resistance genes [BR:
ljh01504
]
Gene variants
Macrolide resistance genes
Transporters
LJP_1044c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
ABC_tran_Xtn
UBA_NBR1_C
Motif
Other DBs
NCBI-ProteinID:
AEB93369
LinkDB
All DBs
Position
complement(1127872..1129251)
Genome browser
AA seq
459 aa
AA seq
DB search
MGSIKISNVSFRYEDSSNHIFNNLNLDLDSSWKLGLVGRNGRGKTTFLNLLQGKLVGRGE
IQTKLNFSYYPIRIKDPANITLYELQDQIMFEQWKLERELNLMHVDSNLIWQSFNTLSGG
EQTKILLALSFIDENSFPLIDEPTNHLDEESRQEICKYLTKHHKGYIVVSHDRNFLNQVT
DHVLAIENTEIHLYQGNYATYEQIKEARDEFNREKNEKIAGEIKNLHNQKEQFYHWAQKI
EARKNLGQKTQYILNRRARVNKAAIGHAAAKMMKKSITRRNRMDKKIEEKEGLMVNIEDI
PKLTMNFQSNYHSAFLKFLLNKVSANSNGRCELTNGLRISYLPQDLTIYQGSLKNFALHQ
KLSYEDLLNILKKMGFPHTNFNVPIEEMSMGQQKRIALAKSLLEPADLYLWDEPANYLDV
FNQDQLINLLQEVKPAMLLIDHDQYFIEQVADERIKLAN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtattaaaatttcgaatgtatcatttaggtatgaagatagcagcaaccatatt
tttaataatttaaatctagacttagatagctcttggaagttaggattagttggtagaaat
ggacgaggaaaaacaacttttcttaatcttttacagggaaaattagttggaagaggtgaa
attcaaactaaattgaatttttcctattatccaattaggattaaggatccagctaatatc
actttatacgaattacaagatcaaattatgtttgaacaatggaaactagagcgtgagctg
aatttaatgcacgttgattcaaatttaatctggcagtcatttaatactttaagcggcgga
gaacagaccaaaattttattagccttatcatttattgatgagaattcttttcctcttatt
gatgagcctacaaatcatttagatgaagaaagtcgtcaggaaatctgtaaatatttaact
aagcatcataaaggatatattgttgtaagtcatgatcgtaattttttaaatcaagtaact
gatcatgtgctagcaatcgaaaatactgaaattcatttatatcaaggaaattatgcaaca
tatgaacaaattaaagaagcacgtgatgaattcaatcgtgaaaagaatgaaaaaatagct
ggtgaaattaaaaatttacataatcaaaaagagcaattttatcattgggcacaaaaaata
gaagctagaaaaaatttgggacaaaaaacacaatatatacttaaccgtagagctagagta
aataaggctgcgattggacatgcagcagccaaaatgatgaagaaatctattacacgtaga
aatagaatggataaaaagattgaagaaaaagaaggattgatggttaatattgaagatata
ccaaaattaacgatgaattttcaatctaattatcattccgcttttttaaaattcttattg
aataaggtctcagcaaatagtaatgggagatgcgagctaactaatggattaagaatttcg
tatttaccacaagatttaacaatatatcaagggagtttaaagaattttgcgcttcatcaa
aaattgtcttatgaggatttgcttaatattttgaagaagatgggctttcctcatactaac
tttaatgtgccaattgaagagatgagtatgggacaacagaaaagaatcgctttagctaaa
tcactacttgaaccagcagatttgtatttatgggatgaaccagcaaactatctagatgtt
tttaaccaagatcaattgattaacttactacaagaagtaaaaccagctatgcttttaatt
gaccatgaccagtattttattgaacaagttgccgatgaaagaattaaattagctaactaa
DBGET
integrated database retrieval system
