Lactobacillus johnsonii DPC 6026: LJP_1091c
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Entry
LJP_1091c CDS
T01960
Name
(GenBank) beta-lactamase superfamily hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ljh03016
]
LJP_1091c
Enzymes [BR:
ljh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LJP_1091c
Transfer RNA biogenesis [BR:
ljh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LJP_1091c
Prokaryotic type
LJP_1091c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AEB93414
LinkDB
All DBs
Position
complement(1179741..1180670)
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AA seq
309 aa
AA seq
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MEIQFLGTSAGQPSKSRNVSCTALKLLDELNEVWLFDVGEATQHQILKTNIRPRKVTRIF
ISHTHGDHIFGLPGFLSSRSFQGDGGPLTIYGPAGIEQFVQTSLRVSKTRVSYPIKYVVL
KEDGLIFENDIFAVYTARLDHRVPSFGFRVVEKPRPGELLMDKVAEYNVPNGPLLGQLKA
GKTITLSDGQKLDGRDFLGEERPGRIVTIIYDTRPTKNIGELADNADVLVHESTFDGGEE
KMAHRYFHSTCLDAARVARDHNVGELYLTHISARYTGRAGRQLEHDARKIFKHTHLANDL
DNFEITLRG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacaatttttaggaacaagtgcggggcaaccatcaaaaagtagaaatgtttct
tgtaccgcactaaagttattagatgaattaaatgaagtatggctatttgatgtgggagaa
gctacacaacatcaaattttaaagactaacattagacctagaaaagtaacgcgaatcttt
atttcacatactcatggtgaccatatttttggacttccaggttttctctcatctcgttct
tttcaaggcgatggtggtccactaacaatttatggtccagctggtattgaacaatttgta
caaacttctctcagggtttctaaaactcgcgtttcatatccgattaagtatgtggtttta
aaagaagacggcttaatttttgaaaatgatatttttgcagtttacacggctcgtttagat
caccgagtaccgagttttggctttcgtgtagttgaaaagccacgtccaggtgaattatta
atggataaagtggcagaatacaatgtacctaatggaccacttcttggtcaattaaaggct
ggaaaaacaattacattaagtgatggccaaaaactagatggacgtgattttcttggagaa
gagcgtccaggacgaattgtaacaattatttatgatactcggccaacaaaaaatattggt
gaattagcagataatgctgatgtgctagttcatgaatcaacatttgatgggggagaagaa
aaaatggcccatcgctacttccattcaacttgcttggatgcagctcgagttgctcgagat
cataatgttggagagctttatttaactcacatttctgctcgctatactggaagagctggt
agacaattagaacatgatgctcgaaagatttttaaacatactcacttagctaatgatcta
gataattttgaaatcacattgaggggataa
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