Lactobacillus johnsonii DPC 6026: LJP_1152c
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Entry
LJP_1152c CDS
T01960
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh03030
DNA replication
ljh03430
Mismatch repair
ljh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LJP_1152c
03430 Mismatch repair
LJP_1152c
03440 Homologous recombination
LJP_1152c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljh03032
]
LJP_1152c
03400 DNA repair and recombination proteins [BR:
ljh03400
]
LJP_1152c
Enzymes [BR:
ljh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LJP_1152c
DNA replication proteins [BR:
ljh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LJP_1152c
DNA repair and recombination proteins [BR:
ljh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LJP_1152c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
RelA_SpoT
Motif
Other DBs
NCBI-ProteinID:
AEB93474
LinkDB
All DBs
Position
complement(1245950..1246939)
Genome browser
AA seq
329 aa
AA seq
DB search
MTLISLFKQTNPKNANLLIQGPDSFFNDYLVRNYLNQKSFSELDQVIVDCLEDGLDELMA
TLTESSLFSNQKVVVVKNPFFLMAKVPQKFKKQVEKLTKIIEHLSDLEDVVVFVANYEKI
DRRKKISKLLLEHVNVVETTFKPYEVSGIIKAISKEEGYQITNMALQILIQRSDQVLDVS
LSNYVKLKNIVGEDKRITETLINENIDRSLSENIFEILTAAFDKKYQEATQRLEDHLREG
ASAIQLLAIFESQFEFLTCVKVLQNRRWSKDQITKELKVNPYRVKLALENKVSLSKLTVL
LKQAIELDFGYKNGTYHGDEFLKLFLLKI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacattaatctctctttttaaacagactaatcctaagaatgctaatcttttgattcaa
ggaccagattcattttttaatgattatttggttcgcaactacctcaatcaaaaatctttt
tctgaacttgatcaagtgattgtagactgccttgaagatggacttgatgaattaatggca
actttaaccgagtcttctttattcagtaaccagaaagttgtggttgtgaagaatcctttc
tttttaatggctaaagtaccacaaaagtttaaaaaacaagttgaaaaattaactaaaatc
attgaacatttgagtgatttagaagatgtagttgtttttgtggctaattatgaaaaaatt
gatcgtagaaaaaagattagtaaacttttgcttgaacatgttaatgtggttgaaactacg
tttaaaccctatgaagttagtggaataattaaggccataagtaaagaagaaggatatcaa
attactaatatggcgcttcaaatattgatccaaagaagtgaccaagttctagacgtctca
ttaagtaactatgtaaaattaaaaaatattgttggtgaagataaaaggatcacggaaaca
ctaattaatgaaaatattgatcgttctctttcagaaaatatttttgaaatattaacagct
gcttttgataaaaaatatcaagaggctactcaacgtttagaggatcatttacgagaaggg
gcaagtgcaattcagctactagctatttttgaatctcaatttgaatttttgacttgtgtt
aaagttttgcagaatagacggtggagtaaagatcaaattactaaagagttaaaagtgaat
ccgtatcgagtaaaattagcccttgaaaataaagtctcattaagtaaattaacagtgttg
ctaaagcaggcgattgaacttgattttggttacaaaaacggaacttatcacggggatgag
ttcttgaagctctttttattaaaaatttag
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