Lactobacillus johnsonii DPC 6026: LJP_1165c
Help
Entry
LJP_1165c CDS
T01960
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LJP_1165c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljh03400
]
LJP_1165c
Enzymes [BR:
ljh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LJP_1165c
DNA repair and recombination proteins [BR:
ljh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LJP_1165c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
AAA_11
Viral_helicase1
UvrD_C
UvrD-helicase
AAA_22
RsgA_GTPase
T2SSE
DEAD
NTPase_1
AAA_29
AAA_28
AAA_5
NPHP3_N
DUF1002
MCM4_WHD
Motif
Other DBs
NCBI-ProteinID:
AEB93487
LinkDB
All DBs
Position
complement(1259368..1261743)
Genome browser
AA seq
791 aa
AA seq
DB search
MAETSFTGRINGIVFENNQDLFKIIDVDLISKLPDYDRDNIRVTGNFGDIQIGSTYKFTG
NIVVHEKFGKQFRIRSYEPVLPHEEGSLAKYLSSDKFPGIGKRAAEKIIDSLGTNALDLI
KSNQTEIDNLDLTQKQKDSLLSGINQMDSFSEIVIKLARYGINKKVAGNIYKVYHGDSLK
KLEEDPYQALGEVRGFGFKTADNMGHALGIELNDPRRVRGALLSILQTALNTLGDTYVAL
DELLTQAYDLVQSTSYDELANSVNELQRQGKVVVSGDKAALQTIFQTELDIATELKHVVN
NQVEKEEFDDSDIEKAIKHVEETLEIEYDDTQKNAIKNALNNPISILTGGPGTGKTTIIN
GILMCLKELAEIPSAALYSDDPPFLLAAPTGRAAKRMSEVTDISAKTIHRLLGLGIGENE
ATDVNELNGEILIIDEMSMVDMFLFKQLLSGINSTKRIVFVGDKDQLPSVGAGNVFSDLI
SSGAFPTTKLQVIHRQGEDSSIIKLAHAINDEEAEETIFNKTKNYSFIPCQPSLVGDAID
QIVNLAIKRGFKKDDVQVLGAMYNGQGGITHLNDILQDVMNPLSAKTKVIEAHNESFRIG
DRILQLQNNPEKDIYNGQIGKIIGLNPDDKAKILIADFDGREIEFGIKDLNDITRAYAIT
IHKSQGSEFPLVILNLTMQNYMMLRRNLLYTAITRAEKNLVMVGEKKAYIMALRTPGNDR
KTELAAKIRYELGLKEVENTSNVNAEQEKTKTEVKEENVEPEDYILTPELIYSGQIDPMI
GMEDIKLEEKR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactagttttactggacgaataaatggaattgtttttgaaaacaatcaagat
cttttcaagattattgatgtagatttaatcagtaaattacctgattacgatcgtgataat
atccgagtaactggaaattttggggatatccaaattggatcaacttataaatttaccggt
aatattgtcgtgcacgaaaaatttggtaaacaatttcgtataaggtcttatgaaccagtt
ttgcctcatgaagagggtagtttagctaaataccttagttctgataagtttcctggaatc
ggtaagagggctgctgaaaagatcattgatagtttaggaacaaatgcgttagatttgatt
aagtcaaatcaaactgaaattgacaatcttgatttgacccaaaagcaaaaggatagctta
ttatctggaattaatcagatggattctttttcagagattgtgattaagctggctagatat
gggattaataaaaaagtagccggtaatatttataaagtgtatcatggtgattccttgaag
aaactagaggaagatccttatcaagcccttggtgaagttcgcggctttgggtttaaaact
gcggataatatgggacacgcgctcggaatagaactaaatgatcctagaagagttagggga
gcacttctaagtattttacagactgctcttaataccttgggagatacttatgttgcactt
gatgaattattaacacaggcttatgatttagttcaatctacctcttatgatgagcttgct
aatagtgttaatgaacttcaaaggcaaggaaaagttgttgtttcaggtgataaggcagct
ttgcagacaatttttcaaactgaacttgatatagccactgaattaaaacatgtagttaat
aatcaagtcgaaaaagaagaatttgatgatagcgatattgaaaaagcaataaagcatgtc
gaagaaacacttgaaattgaatatgatgatactcaaaaaaatgcaattaaaaatgcgtta
aataatccaatttcaattcttactggtggtcctggtactggtaaaacgacaattatcaat
ggaattttaatgtgcttaaaggaacttgcggaaattccaagtgcagctttgtatagcgat
gatccaccatttttacttgctgcaccaacgggtcgagctgccaagcgaatgagtgaggtt
acagatatttcagcgaaaaccattcaccgtttattagggttaggcatcggtgaaaatgaa
gcgactgatgtaaacgaattaaacggtgagatcttaattattgacgaaatgtcgatggtt
gatatgtttctctttaaacagcttttatccggtattaattcaacaaagaggatagttttt
gttggggacaaagaccagcttccttcagttggagcagggaatgtttttagtgatttaata
agttcaggggcatttccaactacaaagttgcaagtaattcatagacagggagaagactcc
tcaattattaagttggcccatgcaattaatgatgaagaagcagaagagactatttttaat
aaaactaaaaattactcctttattccatgtcaaccaagcttggtgggggatgcaatcgat
caaatcgtaaatttggctattaaacgtggtttcaaaaaggatgatgttcaagttctggga
gcaatgtacaatggtcaaggtggaattactcacttgaatgatattttgcaggatgtgatg
aatccactgtcggcaaaaactaaagtaattgaagctcacaatgaaagttttagaatcggg
gaccgaatcctacaattacaaaataatccagaaaaagatatttataatggtcaaattggt
aaaattattggccttaatcctgatgataaagccaaaatattaattgctgattttgacggt
cgtgaaatagaatttggtattaaagacttaaatgatattacccgtgcgtatgccattact
atccataagtcccaaggatcagaatttccgttagtaattttaaatcttacgatgcaaaat
tatatgatgttgaggcggaatttgttatataccgccattactcgtgccgaaaaaaactta
gttatggtaggagaaaaaaaggcgtatatcatggcattgcgtactccaggtaatgaccgt
aagactgagttagcagctaaaattaggtacgaactaggtcttaaagaagttgaaaatact
tcaaatgtaaatgcggaacaagagaaaactaaaactgaagttaaagaagaaaatgttgag
ccagaagattatattttgactcctgagctaatttattctggacagattgatccaatgatt
ggaatggaagatattaaattggaagaaaaaagatag
DBGET
integrated database retrieval system
